DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdfy2 and stam2

DIOPT Version :10

Sequence 1:NP_609400.1 Gene:Wdfy2 / 34425 FlyBaseID:FBgn0032246 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_001007370.2 Gene:stam2 / 492497 ZFINID:ZDB-GENE-041114-64 Length:509 Species:Danio rerio


Alignment Length:120 Identity:25/120 - (20%)
Similarity:43/120 - (35%) Gaps:30/120 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PAQRTNNDRFNTSKKPELLSKLEGSSDDVNAAILIPGENGVISVSDDKTVRVWLKRDSGQ---YW 68
            |...||..:  .|:|...|...|.:.|  |......||  ::.:.||.... |.|.::.:   .:
Zfish   195 PPYNTNGGK--ESRKVRALYDFEAAED--NELTFKAGE--LVIILDDSDPN-WWKGENHRGVGLF 252

  Fly    69 PSICQYMPSGCTA------------------IEYVSESRHLYVGQENGTVTQYAL 105
            ||  .::.:...|                  :|..:|...:|:.:|....|.|.|
Zfish   253 PS--NFVTTNLNAEPDPVMYVEKTVVPEEPIVEVKAEPEPVYIDEEKMDKTLYLL 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdfy2NP_609400.1 WD40 24..279 CDD:475233 20/103 (19%)
WD40 repeat 35..72 CDD:293791 9/39 (23%)
WD40 repeat 80..117 CDD:293791 8/44 (18%)
WD40 repeat 125..161 CDD:293791
WD40 repeat 166..205 CDD:293791
WD40 repeat 211..248 CDD:293791
WD40 repeat 253..283 CDD:293791
FYVE_WDFY1_like 287..356 CDD:277258
WD40 repeat 324..371 CDD:293791
stam2NP_001007370.2 VHS_ENTH_ANTH 9..145 CDD:470608
SH3_STAM 206..259 CDD:212754 13/59 (22%)
GAT_STAM2 287..377 CDD:410595 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

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