DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdfy2 and Tom1

DIOPT Version :9

Sequence 1:NP_001188779.1 Gene:Wdfy2 / 34425 FlyBaseID:FBgn0032246 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_001008366.1 Gene:Tom1 / 361370 RGDID:1308024 Length:492 Species:Rattus norvegicus


Alignment Length:64 Identity:16/64 - (25%)
Similarity:23/64 - (35%) Gaps:10/64 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 PELLSKLEGSSDDVNAAI-LIPGENGVISVSDDKTVRVWLKRDSGQYWPSICQYMPSGCTAIEY 84
            |:....|.|:.|....:. .||.....|.    :.:..||..|.|.     ....|||.|:.|:
  Rat   389 PQTTDGLAGALDARQQSTGAIPATQARIM----EDIEQWLSTDVGS-----SAEEPSGVTSEEF 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdfy2NP_001188779.1 WD40 4..405 CDD:225201 16/64 (25%)
WD40 24..279 CDD:295369 15/62 (24%)
WD40 repeat 35..72 CDD:293791 7/37 (19%)
WD40 repeat 80..117 CDD:293791 2/5 (40%)
WD40 repeat 125..161 CDD:293791
WD40 repeat 166..205 CDD:293791
WD40 repeat 211..248 CDD:293791
WD40 repeat 253..283 CDD:293791
FYVE_WDFY1_like 287..356 CDD:277258
WD40 repeat 324..371 CDD:293791
Tom1NP_001008366.1 VHS_Tom1 12..152 CDD:239623
GAT_TOM1 214..308 CDD:260094
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334880
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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