DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdfy2 and Tom1l2

DIOPT Version :9

Sequence 1:NP_001188779.1 Gene:Wdfy2 / 34425 FlyBaseID:FBgn0032246 Length:408 Species:Drosophila melanogaster
Sequence 2:XP_038942234.1 Gene:Tom1l2 / 360537 RGDID:1306728 Length:592 Species:Rattus norvegicus


Alignment Length:144 Identity:32/144 - (22%)
Similarity:53/144 - (36%) Gaps:44/144 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAAEIKPAQRTNND-----------RFNTSKKPELLSKLEGS---------SDDVNAAIL----- 40
            |..|:.|.|..::|           |....:..||:|::...         :||:|...|     
  Rat   305 MLTEMVPGQEDSSDLELLQELNRTCRAMQHRIVELISRVSNEEVTEELLHVNDDLNNVFLRYERF 369

  Fly    41 ---------IPGENGVIS-VSDDKTVRVWLKRDSGQYWPSICQYMPSGCTA--IEYVSESRHLYV 93
                     ....|||:| |::|..:      |.|...|::...| .|.||  ....|:...|.:
  Rat   370 ERYRSGRSVQNASNGVLSEVTEDNLI------DLGPGSPAVVSPM-VGSTAPPSSLSSQLAGLDL 427

  Fly    94 GQENGTVTQYALSE 107
            |.|:.:.|..:|.:
  Rat   428 GTESVSGTLSSLQQ 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdfy2NP_001188779.1 WD40 4..405 CDD:225201 31/141 (22%)
WD40 24..279 CDD:295369 25/110 (23%)
WD40 repeat 35..72 CDD:293791 11/51 (22%)
WD40 repeat 80..117 CDD:293791 8/30 (27%)
WD40 repeat 125..161 CDD:293791
WD40 repeat 166..205 CDD:293791
WD40 repeat 211..248 CDD:293791
WD40 repeat 253..283 CDD:293791
FYVE_WDFY1_like 287..356 CDD:277258
WD40 repeat 324..371 CDD:293791
Tom1l2XP_038942234.1 VHS_ENTH_ANTH 82..212 CDD:413366
GAT_TM1L2 282..373 CDD:410585 13/67 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334885
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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