DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wdfy2 and wdfy-2

DIOPT Version :9

Sequence 1:NP_001188779.1 Gene:Wdfy2 / 34425 FlyBaseID:FBgn0032246 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_495983.1 Gene:wdfy-2 / 174475 WormBaseID:WBGene00008402 Length:415 Species:Caenorhabditis elegans


Alignment Length:390 Identity:144/390 - (36%)
Similarity:226/390 - (57%) Gaps:6/390 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 KPELLSKLEGSSDDVNAAILIPGENGVISVSDDKTVRVWLKRDSGQYWPSICQYMPSGCTAIEYV 85
            ||.||.::.|....:|..||:..:.||.:.|||::||::||||:.|:||||..:||...|::.|.
 Worm    20 KPALLHRITGHVARINDVILLSKDEGVWTASDDRSVRLYLKRDNDQFWPSIHHFMPVAPTSLYYS 84

  Fly    86 SESRHLYVGQENGTVTQYALSEDCNRLSFLRDYLSHQARVMAVVFSKTHKWILSAGKDKQFAYHC 150
            .|:..|.||..||.|.::::::|.|.::..|.:..|...:..:.|:.:.:.|.|..:||...:||
 Worm    85 EETYKLLVGLINGNVYEFSVADDFNSMTESRKWTCHAGPISGLGFALSSELIFSCSRDKSIVWHC 149

  Fly   151 TESGKRVGGYNFETPCTALQFDALAKYAFVGDHAGQITMLRCDVQGVQLITTFNGHSAEIRCLKW 215
            :|:..::|.|..|..|||:..|  ..:.|||||.|.:|:||.......|::..:.|:..|..|.|
 Worm   150 SENSNKMGSYLLENSCTAMVID--LPFVFVGDHGGHVTVLRIVDNQPNLVSKLSAHTNAITSLTW 212

  Fly   216 VEGPQLLFSGACDQSVLVWDVGGKRGTIYELQGHSNKVSALSYANHTQQLISCGEDSVVVFWEMN 280
            ....::|:||:.|..:::||:||.||..|||.||:.||:.|..|...::|.|..|...::.|:||
 Worm   213 DGNKKVLYSGSSDHLIIMWDIGGGRGEAYELNGHNGKVTTLCAAPAAKRLFSADEHGKLMCWDMN 277

  Fly   281 AMRKEVPGWVDTNNCQLCSRPFFWNFRSMMDQKQLGIRQHHCRHCGKAVCDNCSTNRINIPIMGF 345
            ..|.|.|.|..::.||.|::|||||.::|..:|.:|:||||||.||.|||.:|..|....|.||:
 Worm   278 CKRVETPEWKTSDCCQKCNQPFFWNLQAMWQRKVVGLRQHHCRTCGSAVCGSCCDNWTTYPPMGY 342

  Fly   346 EFDVRTCDPCYKQL----QTVERPSLASFNDAKHSIVYMDLDEDRKRLLTVGQDRLIKIWDLSNI 406
            |..:|.|:.|..::    |......||..::....|..|.|.|....|:|.||:|:|.|||:.::
 Worm   343 ETKIRICNDCNARMKDNPQNFNLTPLAIPHEIHTGITAMHLQETLGLLVTSGQNRVIMIWDVRSV 407

  Fly   407  406
             Worm   408  407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdfy2NP_001188779.1 WD40 4..405 CDD:225201 144/387 (37%)
WD40 24..279 CDD:295369 89/254 (35%)
WD40 repeat 35..72 CDD:293791 18/36 (50%)
WD40 repeat 80..117 CDD:293791 11/36 (31%)
WD40 repeat 125..161 CDD:293791 9/35 (26%)
WD40 repeat 166..205 CDD:293791 14/38 (37%)
WD40 repeat 211..248 CDD:293791 15/36 (42%)
WD40 repeat 253..283 CDD:293791 9/29 (31%)
FYVE_WDFY1_like 287..356 CDD:277258 32/68 (47%)
WD40 repeat 324..371 CDD:293791 17/50 (34%)
wdfy-2NP_495983.1 WD40 23..281 CDD:295369 91/259 (35%)
WD40 26..>289 CDD:225201 93/264 (35%)
WD40 repeat 79..119 CDD:293791 12/39 (31%)
WD40 repeat 124..163 CDD:293791 10/38 (26%)
WD40 repeat 164..202 CDD:293791 14/39 (36%)
WD40 repeat 207..244 CDD:293791 15/36 (42%)
WD40 repeat 251..283 CDD:293791 9/31 (29%)
FYVE_WDFY1_like 284..353 CDD:277258 32/68 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167530
Domainoid 1 1.000 133 1.000 Domainoid score I3140
eggNOG 1 0.900 - - E2759_KOG1409
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H14188
Inparanoid 1 1.050 297 1.000 Inparanoid score I1653
Isobase 1 0.950 - 0.906565 Normalized mean entropy S2219
OMA 1 1.010 - - QHG52290
OrthoDB 1 1.010 - - D228338at33208
OrthoFinder 1 1.000 - - FOG0002613
OrthoInspector 1 1.000 - - oto19976
orthoMCL 1 0.900 - - OOG6_105115
Panther 1 1.100 - - LDO PTHR46189
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2899
SonicParanoid 1 1.000 - - X2322
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1716.790

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