DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdfy2 and Gga1

DIOPT Version :9

Sequence 1:NP_001188779.1 Gene:Wdfy2 / 34425 FlyBaseID:FBgn0032246 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_666041.1 Gene:Gga1 / 106039 MGIID:2146207 Length:635 Species:Mus musculus


Alignment Length:120 Identity:24/120 - (20%)
Similarity:46/120 - (38%) Gaps:35/120 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PAQRTNNDRFNTSKKPELLSKLEGSS--DDVNAAILIPGENGVISVSDDKTVRVWLKRDSGQYWP 69
            |..|..|..|...:|.::|::|..||  :|:.||              :|.::..::.|..:   
Mouse   160 PPPRPKNVIFEDEEKSKMLARLLKSSHPEDLRAA--------------NKLIKEMVQEDQKR--- 207

  Fly    70 SICQYMPSGCTAIEYVSES----RHLYVGQENGTVTQYALSED--------CNRL 112
              .:.:.....|||.|:.:    ..:.:....|..:  :.|||        |.|:
Mouse   208 --MEKISKRVNAIEEVNNNVKLLTEMVMSHSQGAAS--SSSEDLMKELYQRCERM 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdfy2NP_001188779.1 WD40 4..405 CDD:225201 24/120 (20%)
WD40 24..279 CDD:295369 19/103 (18%)
WD40 repeat 35..72 CDD:293791 4/36 (11%)
WD40 repeat 80..117 CDD:293791 10/45 (22%)
WD40 repeat 125..161 CDD:293791
WD40 repeat 166..205 CDD:293791
WD40 repeat 211..248 CDD:293791
WD40 repeat 253..283 CDD:293791
FYVE_WDFY1_like 287..356 CDD:277258
WD40 repeat 324..371 CDD:293791
Gga1NP_666041.1 VHS_GGA 9..147 CDD:239624
Interaction with ARF3. /evidence=ECO:0000250 114..273 24/120 (20%)
DUF327 <180..234 CDD:294489 12/72 (17%)
GAT_GGA1_GGA2 210..298 CDD:260097 10/51 (20%)
Unstructured hinge 299..505
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 305..349
Autoinhibitory. /evidence=ECO:0000250 357..361
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 362..422
DUF1176 <382..>445 CDD:284160
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 455..490
Alpha_adaptinC2 513..627 CDD:197886
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831166
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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