DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdfy2 and STAM2

DIOPT Version :9

Sequence 1:NP_001188779.1 Gene:Wdfy2 / 34425 FlyBaseID:FBgn0032246 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_005834.4 Gene:STAM2 / 10254 HGNCID:11358 Length:525 Species:Homo sapiens


Alignment Length:86 Identity:21/86 - (24%)
Similarity:32/86 - (37%) Gaps:21/86 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 DCNRLSFL----RDYLSHQARVMAVVFSKTH------------KWILSAGKDKQFA-YHCTESGK 155
            :|.::..|    ||:.:   .|.||:.:|.|            :|.....||.||: ...|....
Human    75 NCGKIFHLEVCSRDFAT---EVRAVIKNKAHPKVCEKLKSLMVEWSEEFQKDPQFSLISATIKSM 136

  Fly   156 RVGGYNFETPCTALQFDALAK 176
            :..|..| .|..:....|.||
Human   137 KEEGITF-PPAGSQTVSAAAK 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdfy2NP_001188779.1 WD40 4..405 CDD:225201 21/86 (24%)
WD40 24..279 CDD:295369 21/86 (24%)
WD40 repeat 35..72 CDD:293791
WD40 repeat 80..117 CDD:293791 2/12 (17%)
WD40 repeat 125..161 CDD:293791 12/48 (25%)
WD40 repeat 166..205 CDD:293791 3/11 (27%)
WD40 repeat 211..248 CDD:293791
WD40 repeat 253..283 CDD:293791
FYVE_WDFY1_like 287..356 CDD:277258
WD40 repeat 324..371 CDD:293791
STAM2NP_005834.4 VHS_STAM 9..143 CDD:239625 16/70 (23%)
PxVxL motif 54..67
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 143..167 5/15 (33%)
UIM 166..181 CDD:280900
SH3_STAM2 204..260 CDD:212896
Interaction with USP8. /evidence=ECO:0000250 219..220
GAT 296..367 CDD:281166
Interaction with HGS. /evidence=ECO:0000250 334..368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141216
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.930

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