DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wdfy2 and tom1l2

DIOPT Version :9

Sequence 1:NP_001188779.1 Gene:Wdfy2 / 34425 FlyBaseID:FBgn0032246 Length:408 Species:Drosophila melanogaster
Sequence 2:XP_009298168.1 Gene:tom1l2 / 100535615 -ID:- Length:551 Species:Danio rerio


Alignment Length:134 Identity:28/134 - (20%)
Similarity:42/134 - (31%) Gaps:48/134 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KPAQRT----NNDRFNT-----SKKPELLSKLEGSSDDVNAAI---------LIPGENGVISVSD 52
            |||...    ||....|     |..||.:::|....|.|...|         ::||:.....:  
Zfish   194 KPAAAAAPVFNNTHIQTAAGPISANPEQIARLRSELDIVRGNIKVMSEMLTEMVPGQEDASDL-- 256

  Fly    53 DKTVRVWLKRDSGQYWPSICQYMPSGCTA-----IEYVSESRHLYVGQENGTVTQYALSEDCNRL 112
                             .:.|.:...|.|     :|.:|.     |..|..|......::|.|.:
Zfish   257 -----------------ELLQELNRTCRAMQHRIVELISR-----VSNEEVTEELLHANDDLNNM 299

  Fly   113 SFLR 116
             |||
Zfish   300 -FLR 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdfy2NP_001188779.1 WD40 4..405 CDD:225201 28/134 (21%)
WD40 24..279 CDD:295369 19/107 (18%)
WD40 repeat 35..72 CDD:293791 4/45 (9%)
WD40 repeat 80..117 CDD:293791 11/42 (26%)
WD40 repeat 125..161 CDD:293791
WD40 repeat 166..205 CDD:293791
WD40 repeat 211..248 CDD:293791
WD40 repeat 253..283 CDD:293791
FYVE_WDFY1_like 287..356 CDD:277258
WD40 repeat 324..371 CDD:293791
tom1l2XP_009298168.1 VHS_Tom1 12..152 CDD:239623
GAT_SF 219..310 CDD:296121 21/109 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574129
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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