DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wdfy2 and gga3b

DIOPT Version :9

Sequence 1:NP_001188779.1 Gene:Wdfy2 / 34425 FlyBaseID:FBgn0032246 Length:408 Species:Drosophila melanogaster
Sequence 2:XP_009297383.1 Gene:gga3b / 100334661 ZFINID:ZDB-GENE-131126-18 Length:709 Species:Danio rerio


Alignment Length:36 Identity:12/36 - (33%)
Similarity:19/36 - (52%) Gaps:3/36 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 IPGENGVISVSDDKTVRVWLKRDSGQYWPSICQYMP 76
            :|..|.|:..:..|::||.|:..||   ..||.:.|
Zfish   623 LPVRNVVLQAAVPKSMRVKLQPPSG---TEICPFNP 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdfy2NP_001188779.1 WD40 4..405 CDD:225201 12/36 (33%)
WD40 24..279 CDD:295369 12/36 (33%)
WD40 repeat 35..72 CDD:293791 9/30 (30%)
WD40 repeat 80..117 CDD:293791
WD40 repeat 125..161 CDD:293791
WD40 repeat 166..205 CDD:293791
WD40 repeat 211..248 CDD:293791
WD40 repeat 253..283 CDD:293791
FYVE_WDFY1_like 287..356 CDD:277258
WD40 repeat 324..371 CDD:293791
gga3bXP_009297383.1 VHS_GGA 11..148 CDD:239624
PARP_reg <133..207 CDD:280950
GAT_GGA3 215..301 CDD:260098
Alpha_adaptinC2 588..701 CDD:197886 12/36 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574128
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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