Protein Alignment RfC3 and RAD24

DIOPT Version :9

• Sequence 1: NP_609399.1
• Gene: RfC3 / 34423
• FlyBaseID: FBgn0032244
• Length: 332
• Species: Drosophila melanogaster
• Sequence 2: NP_011100.1
• Gene: RAD24 / 856920
• SGDID: S000000975
• Length: 659
• Species: Saccharomyces cerevisiae
• Alignment Length: 293
• Identity: 59/293 - (20%)
• Similarity: 108/293 - (36%)
• Gaps: 81/293 - (27%)

  Fly    13 WVEKYRPSGLDDLISHEEIISTITRFISRKQLPH-----LLFYGPPGTGKTSTILACA------- 65
            |.||::|:.|:.:..|:..:..:...:....||:     ||..||.|..|::.|...:
Yeast    66 WYEKFKPNCLEQVAIHKRKLKDVQEALDAMFLPNAKHRILLLSGPSGCSKSTVIKELSKILVPKY 130

  Fly    66 RQLYSPQQFKSMVLELNASDDRGIGIVRG--QILNFA----STRTIFCDTFKLIILDEADAMTN- 123
            ||..:...|:|...|...::.||..||..  |:.:|:    ..|.:......||::::...:.:
Yeast   131 RQNSNGTSFRSTPNEHKVTEFRGDCIVNDLPQMESFSEFLKGARYLVMSNLSLILIEDLPNVFHI 195

  Fly   124 DAQNALRRIIEK--YTDNVRF--CVIC-----------NY--------------LSKIIPALQSR 159
            |.:...:::|.:  |:.....  .|||           ||              ::|.| .:..|
Yeast   196 DTRRRFQQLILQWLYSSEPLLPPLVICITECEIPENDNNYRKFGIDYTFSAETIMNKEI-LMHPR 259

  Fly   160 CTRFRFAPLSQDQMMPRLEKIIEAEAVQITEDGK-----RALLTLAK--GDMRKVLNVLQ----- 212
            ..|.:|.|::...:...|:.|.......:.|..|     ..:..:|:  ||:|..:..||
Yeast   260 LKRIKFNPINSTLLKKHLKFICVQNMKMLKEKNKWNKRQEVIDYIAQETGDIRSAITTLQFWATS 324

  Fly   213 ----------STVMAFDTV----------NEDN 225
                      ||:..|..:          |.||
Yeast   325 SGSLPISTRESTISYFHAIGKVIHGSHSTNNDN 357

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC3	NP_609399.1	rfc	12..321	CDD:234763	59/293 (20%)
RAD24	NP_011100.1	rad24	1..634	CDD:129690	59/293 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0470
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810