Protein Alignment RfC3 and CTF18

DIOPT Version :9

• Sequence 1: NP_609399.1
• Gene: RfC3 / 34423
• FlyBaseID: FBgn0032244
• Length: 332
• Species: Drosophila melanogaster
• Sequence 2: NP_013795.1
• Gene: CTF18 / 855102
• SGDID: S000004683
• Length: 741
• Species: Saccharomyces cerevisiae
• Alignment Length: 345
• Identity: 85/345 - (24%)
• Similarity: 128/345 - (37%)
• Gaps: 104/345 - (30%)

  Fly    13 WVEKYRPSGLDDLISHEEI-------ISTITRFISRKQLPH----------------------LL 48
            ||||:||....||:.:|:.       :...|..:.::|||.                      ||
Yeast   116 WVEKWRPKKFLDLVGNEKTNRRMLGWLRQWTPAVFKEQLPKLPTEKEVSDMELDPLKRPPKKILL 180

  Fly    49 FYGPPGTGKTSTILACARQLYSPQQFKSMVLELNASDDRGIGIVRGQILNFASTRTIFCDTFK-- 111
            .:||||.||||.....|:|    ..|.  |.|:||||:|...:|:.:|.|.     :|..||.
Yeast   181 LHGPPGIGKTSVAHVIAKQ----SGFS--VSEINASDERAGPMVKEKIYNL-----LFNHTFDTN 234

  Fly   112 --LIILDE-------------ADAMTND--AQNAL------------RRIIEKYTDNVRFCVICN 147
              .::.||             .|.|.:|  |.|.|            ::...|.......|:..|
Yeast   235 PVCLVADEIDGSIESGFIRILVDIMQSDIKATNKLLYGQPDKKDKKRKKKRSKLLTRPIICICNN 299

  Fly   148 YLSKIIPALQSRCTRFRFAPLSQDQMMPRLEKIIEAEAVQITEDGKRALLTLAKGDMRKVLNVLQ 212
            ..:..:..|:..|........|...::.||..|...|.:.|.......|:.||:||:|..:|.||
Yeast   300 LYAPSLEKLKPFCEIIAVKRPSDTTLLERLNLICHKENMNIPIKAINDLIDLAQGDVRNCINNLQ 364

  Fly   213 ---STVMAFD---------------TVNEDNV---YMCVGYPLRQD-----IEQILKAL----LS 247
               |.|.:.|               :.|:|:.   :..|....|:|     .||..:.|    |:
Yeast   365 FLASNVDSRDSSASDKPACAKNTWASSNKDSPISWFKIVNQLFRKDPHRDIKEQFYELLNQVELN 429

  Fly   248 GSS---LEDSFKTVESAKYA 264
            |:|   |:..|......||:
Yeast   430 GNSDRILQGCFNIFPYVKYS 449

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC3	NP_609399.1	rfc	12..321	CDD:234763	85/345 (25%)
CTF18	NP_013795.1	PRK04195	116..>422	CDD:235250	77/316 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	2	1.870