Protein Alignment RfC3 and RFC2

DIOPT Version :10

• Sequence 1: NP_609399.1
• Gene: RfC3 / 34423
• FlyBaseID: FBgn0032244
• Length: 332
• Species: Drosophila melanogaster
• Sequence 2: NP_012602.3
• Gene: RFC2 / 853531
• SGDID: S000003829
• Length: 353
• Species: Saccharomyces cerevisiae
• Alignment Length: 326
• Identity: 118/326 - (36%)
• Similarity: 175/326 - (53%)
• Gaps: 19/326 - (5%)

  Fly    10 RMPWVEKYRPSGLDDLISHEEIISTITRFISRKQLPHLLFYGPPGTGKTSTILACARQLYSPQQF 74
            :.||||||||..||::.:.:..::.:.:.:....|||:||||||||||||||||..::||.|...
Yeast    24 QQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLM 88

  Fly    75 KSMVLELNASDDRGIGIVRGQILNFA----------STRTIFCDTFKLIILDEADAMTNDAQNAL 129
            ||.:|||||||:|||.|||.::.|||          ......|..:|:|||||||:||.|||:||
Yeast    89 KSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSAL 153

  Fly   130 RRIIEKYTDNVRFCVICNYLSKIIPALQSRCTRFRFAPLSQDQMMPRLEKIIEAEAVQITEDGKR 194
            ||.:|.|:...|||:||||:::||..|.|||::|||..|.....:.||..|.|.|.|:..:....
Yeast   154 RRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQENVKCDDGVLE 218

  Fly   195 ALLTLAKGDMRKVLNVLQSTVMAFD------TVNEDNVYMCVGYPLRQDIEQILKALLSGSSLED 253
            .:|.::.||:|:.:.:|||......      .:....|....|......:.:|::.:.||..  |
Yeast   219 RILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAGVVPHDILIEIVEKVKSGDF--D 281

  Fly   254 SFKTVESAKYARGLALEDIITELH-LFVMRLELPMSVMNKLIVKLAQIEERLAKGCTEVAQTAAL 317
            ..|...:.....|.:...::.:|| .::.......:..|::...|...:.||..|..|..|...|
Yeast   282 EIKKYVNTFMKSGWSAASVVNQLHEYYITNDNFDTNFKNQISWLLFTTDSRLNNGTNEHIQLLNL 346

  Fly   318 V 318
            :
Yeast   347 L 347

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC3	NP_609399.1	rfc	12..321	CDD:234763	118/324 (36%)
RFC2	NP_012602.3	rfc	23..353	CDD:234763	118/326 (36%)