Protein Alignment RfC3 and RFC3

DIOPT Version :10

• Sequence 1: NP_609399.1
• Gene: RfC3 / 34423
• FlyBaseID: FBgn0032244
• Length: 332
• Species: Drosophila melanogaster
• Sequence 2: NP_177871.1
• Gene: RFC3 / 844083
• AraportID: AT1G77470
• Length: 369
• Species: Arabidopsis thaliana
• Alignment Length: 327
• Identity: 170/327 - (51%)
• Similarity: 230/327 - (70%)
• Gaps: 12/327 - (3%)

  Fly    12 PWVEKYRPSGLDDLISHEEIISTITRFISRKQLPHLLFYGPPGTGKTSTILACARQLYSPQQFKS 76
            ||||||||..|||:.:|.:||.||.|..:..:|||||.||||||||||||||.||:||.| ::::
plant    40 PWVEKYRPQSLDDVAAHRDIIDTIDRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGP-KYRN 103

  Fly    77 MVLELNASDDRGIGIVRGQILNFASTRTIFC--DTFKLIILDEADAMTNDAQNALRRIIEKYTDN 139
            |:|||||||||||.:||.||.:||||::...  .:.||::||||||||.|||.||||:|||||.:
plant   104 MILELNASDDRGIDVVRQQIQDFASTQSFSLGKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKS 168

  Fly   140 VRFCVICNYLSKIIPALQSRCTRFRFAPLSQDQMMPRLEKIIEAEAVQITEDGKRALLTLAKGDM 204
            .||.:|.|:::||||||||||||||||||....|..||:.:||||.:.:::.|..||:.|:.|||
plant   169 TRFALIGNHVNKIIPALQSRCTRFRFAPLDGVHMSQRLKHVIEAERLVVSDCGLAALVRLSNGDM 233

  Fly   205 RKVLNVLQSTVMA--------FDTVNEDNVYMCVGYPLRQDIEQILKALLSGSSLEDSFKTVESA 261
            ||.||:||||.||        ...:.|::||:|.|.||.:|||||...||: ...::.:|.|...
plant   234 RKALNILQSTHMASKEITEEESKQITEEDVYLCTGNPLPKDIEQISHWLLN-KPFDECYKDVSEI 297

  Fly   262 KYARGLALEDIITELHLFVMRLELPMSVMNKLIVKLAQIEERLAKGCTEVAQTAALVAAFFICRD 326
            |..:|||:.||:.|:.||:.::::|.:|..:||..||.||.||:.||.:..|..|:::.|...|.
plant   298 KTRKGLAIVDIVKEITLFIFKIKMPSAVRVQLINDLADIEYRLSFGCNDKLQLGAIISTFTHARS 362

  Fly   327 MV 328
            ::
plant   363 II 364

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC3	NP_609399.1	rfc	12..321	CDD:234763	168/318 (53%)
RFC3	NP_177871.1	rfc	39..357	CDD:234763	168/318 (53%)