Protein Alignment RfC3 and RFC2

DIOPT Version :9

• Sequence 1: NP_609399.1
• Gene: RfC3 / 34423
• FlyBaseID: FBgn0032244
• Length: 332
• Species: Drosophila melanogaster
• Sequence 2: NP_176504.1
• Gene: RFC2 / 842620
• AraportID: AT1G63160
• Length: 333
• Species: Arabidopsis thaliana
• Alignment Length: 329
• Identity: 124/329 - (37%)
• Similarity: 185/329 - (56%)
• Gaps: 10/329 - (3%)

  Fly     2 SETSGPAVRMPWVEKYRPSGLDDLISHEEIISTITRFISRKQLPHLLFYGPPGTGKTSTILACAR 66
            |.::|.....|||||||||.:.|::.:|:.:|.:........:|:|:..||||||||::|||.|.
plant     6 STSTGDGYNEPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAH 70

  Fly    67 QLYSPQQFKSMVLELNASDDRGIGIVRGQILNFASTR-TIFCDTFKLIILDEADAMTNDAQNALR 130
            :|.. ..:|..||||||||||||.:||.:|..||..: |:.....|::||||||:||:.||.|||
plant    71 ELLG-TNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQALR 134

  Fly   131 RIIEKYTDNVRFCVICNYLSKIIPALQSRCTRFRFAPLSQDQMMPRLEKIIEAEAVQITEDGKRA 195
            |.||.|:::.||.:.||..:|||..:||||...||:.||..|::.||..::.||.|....:|..|
plant   135 RTIEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDQQILGRLLVVVAAEKVPYVPEGLEA 199

  Fly   196 LLTLAKGDMRKVLNVLQSTVMAFDTVNEDNVYMCVGYPLRQDIEQILKALLSGSSLE---DSFKT 257
            ::..|.||||:.||.||:|...|..||::||:.....|....::.|::.:|. |..:   |..|.
plant   200 IIFTADGDMRQALNNLQATFSGFSFVNQENVFKVCDQPHPLHVKNIVRNVLE-SKFDIACDGLKQ 263

  Fly   258 VESAKYARGLALEDIITELHLFVMRLELPMSVMNKLIVKLAQIEERLAKGCTEVAQTAALVAAFF 322
            :    |..|.:..||||.|...:...::...:..:.:.:......|:..|.....|...|:|...
plant   264 L----YDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQLCGLLAKLS 324

  Fly   323 ICRD 326
            |.|:
plant   325 IVRE 328

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC3	NP_609399.1	rfc	12..321	CDD:234763	120/312 (38%)
RFC2	NP_176504.1	PLN03025	16..333	CDD:178596	122/319 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0470
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1071197at2759
OrthoFinder	1	1.000	-	-		FOG0000505
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100321
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	5	4.720