Protein Alignment RfC3 and AT4G24790

DIOPT Version :10

• Sequence 1: NP_609399.1
• Gene: RfC3 / 34423
• FlyBaseID: FBgn0032244
• Length: 332
• Species: Drosophila melanogaster
• Sequence 2: NP_194210.2
• Gene: AT4G24790 / 828581
• AraportID: AT4G24790
• Length: 857
• Species: Arabidopsis thaliana
• Alignment Length: 332
• Identity: 69/332 - (20%)
• Similarity: 132/332 - (39%)
• Gaps: 67/332 - (20%)

  Fly    15 EKYRPSGLDDLISHEEIISTITRFISRKQLPHL-LFYGPPGTGKTST--ILACARQLYSPQQFKS 76
            :|:||...|:|:..|.::..:...|.|.::..: ||:||.|||||||  |.|.|....|
plant   243 QKFRPKSFDELVGQEVVVKCLLSTILRGRITSVYLFHGPRGTGKTSTSKIFAAALNCLS------ 301

  Fly    77 MVLELNASDDRGIGIV---------RGQ------------------ILNFASTRTIFCDTFKLII 114
                 .|:..|..|:.         ||:                  ::..||...: ...||:.|
plant   302 -----QAAHSRPCGLCSECKSYFSGRGRDVMETDSGKLNRPSYLRSLIKSASLPPV-SSRFKVFI 360

  Fly   115 LDEADAMTNDAQNALRRIIEKYTDNVRFCVICNYLSKIIPALQSRCTRFRFAPLSQDQMMPRLEK 179
            :||...:..:....|...::.::.:..|.::.:.|.|:...:.||..::.|:.:....:..:|.|
plant   361 IDECQLLCQETWGTLLNSLDNFSQHSVFILVTSELEKLPRNVLSRSQKYHFSKVCDADISTKLAK 425

  Fly   180 IIEAEAVQITEDGKRALLTLAKGDMRKVLNVLQSTVMAFDTVNEDNVYMCVGYPLRQDIEQILKA 244
            |...|.:...:.....:.:.:.|.:|....:|....:....:.....|..:|.....::..:|..
plant   426 ICIEEGIDFDQGAVDFIASKSDGSLRDAEIMLDQLSLLGKRITTSLAYKLIGVVSDDELLDLLDL 490

  Fly   245 LLSGSSLEDSFKTVESAKYARGLALEDIITELHLFVMRLEL-PMSVMNKLIVKLAQIEERLAKGC 308
            .:|    .|:..||..|:            ||    ||.:: ||    :||.:||.:...:..|.
plant   491 AMS----SDTSNTVIRAR------------EL----MRSKIDPM----QLISQLANVIMDIIAGN 531

  Fly   309 TEVAQTA 315
            ::.:.:|
plant   532 SQESSSA 538

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC3	NP_609399.1	rfc	12..321	CDD:234763	69/332 (21%)
AT4G24790	NP_194210.2	PRK12323	239..587	CDD:481241	69/332 (21%)