Protein Alignment RfC3 and Rfc3

DIOPT Version :9

• Sequence 1: NP_609399.1
• Gene: RfC3 / 34423
• FlyBaseID: FBgn0032244
• Length: 332
• Species: Drosophila melanogaster
• Sequence 2: NP_081285.1
• Gene: Rfc3 / 69263
• MGIID: 1916513
• Length: 356
• Species: Mus musculus
• Alignment Length: 367
• Identity: 99/367 - (26%)
• Similarity: 152/367 - (41%)
• Gaps: 89/367 - (24%)

  Fly    13 WVEKYRPSGLDDLISHEEIISTITRFISRKQLPHLLFYGPPGTGKTSTILACARQLY-------- 69
            ||:|||||.|..|..|:|..:.:...:.....||||.|||.|.||.:.|:...|:||
Mouse     4 WVDKYRPSSLARLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGIGVEKLR 68

  Fly    70 -------SPQQFKSMV--------LELNASD----DRGI------GIVRGQILNFASTRTIFCDT 109
                   :|.:.|..:        ||:|.||    ||.:      .:.:.|.|..:|.|     .
Mouse    69 IEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLETSSQR-----D 128

  Fly   110 FKLIILDEADAMTNDAQNALRRIIEKYTDNVRFCVICNYLSKIIPALQSRCTRFRFAPLSQDQMM 174
            ||:::|.|.|.:|.|||:||||.:|||....|..:.||..||:||.::|||...|....|.:.:.
Mouse   129 FKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIEDIC 193

  Fly   175 PRLEKIIEAEAVQITEDGKRALLTLAKGDMRKVLNVLQSTVMAFDTVNEDNVYMCVG-----YPL 234
            ..|..:...|.:.:.....|.|...:..::||.|                  .||..     ||.
Mouse   194 SVLSTVCRKEGLALPSTLARRLAEKSCRNLRKAL------------------LMCEACRVQQYPF 240

  Fly   235 RQD-----------IEQILKALLSGSSLEDSFKTVESAKYARGLALEDIIT-----ELHLFVMRL 283
            .:|           :.:...|::|.       :|.:.....|| .|.:::|     |:.:..:..
Mouse   241 TEDQEIPETDWEVYLRETANAIVSQ-------QTPQRLLEVRG-RLYELLTHCIPPEIIMKGLLS 297

  Fly   284 ELPMSVMNKLIVKLAQI----EERLAKGCTEVAQTAALVAAF 321
            ||..:...:|..::||:    |.||..|...:....|.||.|
Mouse   298 ELLHNCDGQLKGEVAQMAAYYEHRLQLGSKAIYHLEAFVAKF 339

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC3	NP_609399.1	rfc	12..321	CDD:234763	98/365 (27%)
Rfc3	NP_081285.1	PRK12402	3..339	CDD:237090	98/365 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0470
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1071197at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.820