Protein Alignment RfC3 and rfc4

DIOPT Version :10

• Sequence 1: NP_609399.1
• Gene: RfC3 / 34423
• FlyBaseID: FBgn0032244
• Length: 332
• Species: Drosophila melanogaster
• Sequence 2: NP_001016363.1
• Gene: rfc4 / 549117
• XenbaseID: XB-GENE-955724
• Length: 360
• Species: Xenopus tropicalis
• Alignment Length: 319
• Identity: 133/319 - (41%)
• Similarity: 194/319 - (60%)
• Gaps: 12/319 - (3%)

  Fly    11 MPWVEKYRPSGLDDLISHEEIISTITRFISRKQLPHLLFYGPPGTGKTSTILACARQLYSPQQFK 75
            :||||||||..:|::...||:::.:.:.:....||:|||||||||||||||||.:|:||.|:.|:
 Frog    37 VPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAASRELYGPELFR 101

  Fly    76 SMVLELNASDDRGIGIVRGQILNFA-----STRTIF--CDTFKLIILDEADAMTNDAQNALRRII 133
            ..||||||||:|||.:||.::.|||     .||:..  |..||::||||||:||:.||.||||.:
 Frog   102 QRVLELNASDERGIQVVREKVKNFAQLTVGGTRSDGKPCPPFKIVILDEADSMTSAAQAALRRTM 166

  Fly   134 EKYTDNVRFCVICNYLSKIIPALQSRCTRFRFAPLSQDQMMPRLEKIIEAEAVQITEDGKRALLT 198
            ||.:...|||:||||:|:||..|.|||::|||.||:......||..|.|.|.|:||.:....|:.
 Frog   167 EKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLADKIQTQRLLSICEKENVKITNEAISCLVE 231

  Fly   199 LAKGDMRKVLNVLQST--VMAFDTVNEDNVYMCVGYPLRQDIEQILKALLSGSSLEDSFKTVESA 261
            :::||:||.:..|||.  :.....:.|:.|....|...::.::.:|.|..|||.  :..:||...
 Frog   232 VSEGDLRKAITFLQSATRLTGGKEITEEIVTEIAGVVPKETLDCVLVACQSGSF--EKLETVVKN 294

  Fly   262 KYARGLALEDIITELH-LFVMRLELPMSVMNKLIVKLAQIEERLAKGCTEVAQTAALVA 319
            ....|.|...::.:|| :.:.|.:|.......:..|||::::.||.|..|..|...|.|
 Frog   295 LINNGHAATQLVNQLHDVILERGDLTDKQKAFITEKLAEVDKCLADGADEYLQMLGLFA 353

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC3	NP_609399.1	rfc	12..321	CDD:234763	133/318 (42%)
rfc4	NP_001016363.1	rfc	38..353	CDD:234763	132/316 (42%)