Protein Alignment RfC3 and RfC38

DIOPT Version :9

• Sequence 1: NP_609399.1
• Gene: RfC3 / 34423
• FlyBaseID: FBgn0032244
• Length: 332
• Species: Drosophila melanogaster
• Sequence 2: NP_001285833.1
• Gene: RfC38 / 34550
• FlyBaseID: FBgn0028700
• Length: 356
• Species: Drosophila melanogaster
• Alignment Length: 360
• Identity: 94/360 - (26%)
• Similarity: 154/360 - (42%)
• Gaps: 75/360 - (20%)

  Fly    13 WVEKYRPSGLDDLISHEEIISTITRFISRKQLPHLLFYGPPGTGKTSTILACARQLY-------- 69
            ||:||||..|..|..|::....:.....:...|||:||||.|.||.:.|:...|::|
  Fly     4 WVDKYRPRELSKLDFHKDQAENLRNLCKQSDFPHLMFYGPSGAGKKTRIMCLLREMYGSGVERLR 68

  Fly    70 -------SPQQFKSMV--------LELNASD----DRGIGIVRGQILNFASTRTIFCD---TFKL 112
                   :|...|..|        ||:|.||    ||  .:|...|...|.|..|...   .||:
  Fly    69 SETMTFTTPSNRKVEVMTVSSNYHLEVNPSDAGMYDR--TVVIDLIKQVAQTHQIEISGQREFKV 131

  Fly   113 IILDEADAMTNDAQNALRRIIEKYTDNVRFCVICNYLSKIIPALQSRCTRFRFAPLSQDQMMPRL 177
            |::.|.|.:|.|||:||||.:|||....|..:..|..|:||||::|||...|.|..::.:::..|
  Fly   132 IVISEGDELTKDAQHALRRTMEKYVATCRIIISVNSTSRIIPAIRSRCLGIRVAAPNETEIVSIL 196

  Fly   178 EKIIEAEAVQITEDGKRALLTLAKGDMRKVLNVLQSTVMA---FDTVNED------NVYMCVGYP 233
            :...:.|.:.:..:..:.::..::.::|:.|.:|::..:|   | |.|::      .|:
  Fly   197 QNTCKREGLALPVELAKRVVDKSERNLRRALLMLEAAKVAKAPF-TANQEIPDLDWQVF------ 254

  Fly   234 LRQDIEQILKALLSGSSLEDSFKTVESAKYA------------RGLALEDIITELHLFVMRLELP 286
            ||:...||:     ........:.:....|.            ||| :|.::.         ...
  Fly   255 LRETASQII-----SEQTPAKLEKIRERLYELLTQGVPPNLIFRGL-VEQLVN---------NCD 304

  Fly   287 MSVMNKLIVKLAQIEERLAKGCTEVAQTAALVAAF 321
            ||:..|.:....:.|.|:..|...:....|.||.|
  Fly   305 MSIKAKTLEFATEYEHRMQSGAKHIFHLEAFVAQF 339

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC3	NP_609399.1	rfc	12..321	CDD:234763	93/358 (26%)
RfC38	NP_001285833.1	rfc	3..345	CDD:234763	94/360 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45455782
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0470
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	55	1.000	Inparanoid score	I449
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1071197at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR11669
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	6	5.900