Protein Alignment RfC3 and Rad17

DIOPT Version :9

• Sequence 1: NP_609399.1
• Gene: RfC3 / 34423
• FlyBaseID: FBgn0032244
• Length: 332
• Species: Drosophila melanogaster
• Sequence 2: NP_001019949.1
• Gene: Rad17 / 310034
• RGDID: 1309515
• Length: 686
• Species: Rattus norvegicus
• Alignment Length: 261
• Identity: 67/261 - (25%)
• Similarity: 109/261 - (41%)
• Gaps: 69/261 - (26%)

  Fly    12 PWVEKYRPSGLDDLISHEEIISTITRFISRKQL----PH----LLFYGPPGTGKTSTILACARQL 68
            |||:||:|....:|..|::.|..:..::..:.|    .|    ||..||||.|||:||...:::|
  Rat    89 PWVDKYKPETQHELAVHKKKIEEVETWLKTQVLEVKPKHGGSILLITGPPGCGKTTTIKILSKEL 153

  Fly    69 -YSPQQFKSMVLELNASDDRGIGIVRGQILN---------FASTRTIFCDTF-------KLIILD 116
             ...|::.:.:|:....||      ..::.|         :.|...:|.|..       ||.:|
  Rat   154 GIQVQEWVNPILQDFQKDD------YKELFNSESNFSVIPYQSQIAVFNDFLLRATKYNKLQML- 211

  Fly   117 EADAMTNDAQ---------------NALRRIIEKYTDNVRFCVICNYLSKIIPA----------- 155
             .||:|.|.:               |||..|:.||. ::..|.:...:|..:..
  Rat   212 -GDALTTDKKIILVEDLPNQFYRDANALHEILRKYV-HIGRCPLVFIVSDSVSGDSNHRLLFPKN 274

  Fly   156 LQSRC--TRFRFAPLSQDQMMPRLEKIIEAEA----VQITEDGKRALLTLAK---GDMRKVLNVL 211
            :|..|  :...|.|::...||..|.:|:..||    .:||...|.:|..|.:   ||:|..:|.|
  Rat   275 IQEECSVSNISFNPVAPTIMMKFLNRIVTIEASKNGEKITVPNKASLELLCQGCSGDIRSAINSL 339

  Fly   212 Q 212
            |
  Rat   340 Q 340

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC3	NP_609399.1	rfc	12..321	CDD:234763	67/261 (26%)
Rad17	NP_001019949.1	rad24	13..651	CDD:129690	67/261 (26%)
		AAA_18	133..>253	CDD:289979	33/128 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0470
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810