Protein Alignment RfC3 and rad17

DIOPT Version :9

• Sequence 1: NP_609399.1
• Gene: RfC3 / 34423
• FlyBaseID: FBgn0032244
• Length: 332
• Species: Drosophila melanogaster
• Sequence 2: NP_594918.1
• Gene: rad17 / 2541643
• PomBaseID: SPAC14C4.13
• Length: 606
• Species: Schizosaccharomyces pombe
• Alignment Length: 327
• Identity: 73/327 - (22%)
• Similarity: 118/327 - (36%)
• Gaps: 98/327 - (29%)

  Fly    13 WVEKYRPSGLDDLISHEEIISTITRFISRKQLPH--LLFYGPPGTGKTSTILACARQL-YS---- 70
            |.|||.|....||..|:..||.|.:::....|..  ||..||.|.||::.:...|::| ||
pombe    72 WFEKYIPQKAADLAVHKSKISAIKQWMLTDSLESRLLLICGPSGCGKSTAVQVLAKELGYSLIEW 136

  Fly    71 --------PQQFKSMVLELNASDDRGIGIVRGQILNFASTRTIFCDTF----------------- 110
                    |...:|..|.|.....|.:.:               |:|:
pombe   137 LNPMNLKEPSNQESDTLSLTEKFSRFMSL---------------CETYPELELMDSNNIQKRGKN 186

  Fly   111 -----KLIILDEADAMT--NDAQNALRRIIE-KYTDNVRFCVICNYLSKI----IPALQS----- 158
                 |.|.|||...::  |.:.:|.|.:|. ..|....|.:|. .|::|    :..:.|
pombe   187 AQGKKKFIFLDEIPHLSKFNGSLDAFRNVIRTALTSRGAFSIIM-VLTEIQLNNLEGINSQDRNS 250

  Fly   159 ---------------RCTRFRFAPLSQDQMMPRLEKIIEAEAV-------QITEDGKRALLTLAK 201
                           |.|..:|.|::...|...|..|:..|.|       .:.|:    :.:.::
pombe   251 FNSVQIMGNDLLQDPRVTVLQFNPIAPTYMKKCLGSILRKEGVPKSPKLLSLVEN----ICSASE 311

  Fly   202 GDMRKVLNVLQSTV-MAFDTVNEDNVYMC-----VGYPLRQDIEQILKAL-LSGSSLEDSFKTVE 259
            ||:|..:|.||.:: .:|:.....|:...     .|.....:..|:|:.| .|.|.....||..:
pombe   312 GDLRSAINSLQLSISQSFEKKGTKNIREVKEGKGKGNDFSLEAAQVLERLSKSDSEAYARFKNYK 376

  Fly   260 SA 261
            ||
pombe   377 SA 378

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC3	NP_609399.1	rfc	12..321	CDD:234763	73/327 (22%)
rad17	NP_594918.1	rad24	1..595	CDD:129690	73/327 (22%)
		AAA	91..248	CDD:99707	37/172 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0470
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	3	2.770