Protein Alignment RfC3 and Rfc2

DIOPT Version :9

• Sequence 1: NP_609399.1
• Gene: RfC3 / 34423
• FlyBaseID: FBgn0032244
• Length: 332
• Species: Drosophila melanogaster
• Sequence 2: NP_064406.1
• Gene: Rfc2 / 19718
• MGIID: 1341868
• Length: 349
• Species: Mus musculus
• Alignment Length: 327
• Identity: 124/327 - (37%)
• Similarity: 198/327 - (60%)
• Gaps: 11/327 - (3%)

  Fly     2 SETSGPAVRMPWVEKYRPSGLDDLISHEEIISTITRFISRKQLPHLLFYGPPGTGKTSTILACAR 66
            |:|:| ...:||||||||..|::::.:|:.:|.:..|.....:|:::..||||||||::||..||
Mouse    23 SKTAG-HYELPWVEKYRPLKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLAR 86

  Fly    67 QLYSPQQFKSMVLELNASDDRGIGIVRGQILNFASTR-TIFCDTFKLIILDEADAMTNDAQNALR 130
            .|..| ..|..|||||||:||||.:||.:|..||..: |:.....|:|||||||:||:.||.|||
Mouse    87 ALLGP-ALKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALR 150

  Fly   131 RIIEKYTDNVRFCVICNYLSKIIPALQSRCTRFRFAPLSQDQMMPRLEKIIEAEAVQITEDGKRA 195
            |.:|.|:...||.:.||...|||..:||||...|:..|:..|::.||..:||.|.|..|:||..|
Mouse   151 RTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQVLTRLMNVIEKEKVPYTDDGLEA 215

  Fly   196 LLTLAKGDMRKVLNVLQSTVMAFDTVNEDNVYMCVGYPLRQDIEQILKALLSGSSLEDSFKTVES 260
            ::..|:||||:.||.||||...|..:|.:||:.....|....::::::..:. :::::::| :.:
Mouse   216 IIFTAQGDMRQALNNLQSTFSGFGYINSENVFKVCDEPHPLLVKEMIQHCVD-ANIDEAYK-ILA 278

  Fly   261 AKYARGLALEDIITELHLFVMRLELPMSVMNKL--IVKLAQIEERLAKGCTEVAQTAALVAAFFI 323
            ..:..|.:.||:|.  ::|.:....||:...||  |.::.....::|:|...:.|.|.|:|.  :
Mouse   279 HLWHLGYSPEDVIG--NIFRVCKTFPMAEYLKLEFIKEIGYTHMKVAEGVNSLLQMAGLLAR--L 339

  Fly   324 CR 325
            |:
Mouse   340 CQ 341

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC3	NP_609399.1	rfc	12..321	CDD:234763	120/311 (39%)
Rfc2	NP_064406.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..27		2/3 (67%)
		PLN03025	31..343	CDD:178596	121/318 (38%)
		AAA	46..180	CDD:99707	63/134 (47%)
		AAA_assoc_2	203..>231	CDD:292811	13/27 (48%)
		Rep_fac_C	269..337	CDD:285713	16/70 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0470
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000505
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100321
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.710