Sequence 1: | NP_609399.1 | Gene: | RfC3 / 34423 | FlyBaseID: | FBgn0032244 | Length: | 332 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_500069.1 | Gene: | rfc-2 / 176946 | WormBaseID: | WBGene00004338 | Length: | 334 | Species: | Caenorhabditis elegans |
Alignment Length: | 324 | Identity: | 123/324 - (37%) |
---|---|---|---|
Similarity: | 185/324 - (57%) | Gaps: | 20/324 - (6%) |
- Green bases have known domain annotations that are detailed below.
Fly 12 PWVEKYRPSGLDDLISHEEIISTITRFISRKQLPHLLFYGPPGTGKTSTILACARQLYSPQQFKS 76
Fly 77 MVLELNASDDRGIGIVRGQILNFASTR-TIFCDTFKLIILDEADAMTNDAQNALRRIIEKYTDNV 140
Fly 141 RFCVICNYLSKIIPALQSRCTRFRFAPLSQDQMMPRLEKIIEAEAVQITEDGKRALLTLAKGDMR 205
Fly 206 KVLNVLQSTVMAFDTVNEDNVYMCVGYPLRQDIEQIL-----KALLSGSSLEDSFKTVESAKYAR 265
Fly 266 GLALEDIITELHLFVMRLELPMSVMNKL----IVKLAQIEERLAKGCTEVAQTAALVAAFFICR 325 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RfC3 | NP_609399.1 | rfc | 12..321 | CDD:234763 | 121/318 (38%) |
rfc-2 | NP_500069.1 | PLN03025 | 11..325 | CDD:178596 | 123/324 (38%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0470 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1071197at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000505 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100321 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.720 |