Protein Alignment RfC3 and F44B9.8

DIOPT Version :9

• Sequence 1: NP_609399.1
• Gene: RfC3 / 34423
• FlyBaseID: FBgn0032244
• Length: 332
• Species: Drosophila melanogaster
• Sequence 2: NP_498750.2
• Gene: F44B9.8 / 176131
• WormBaseID: WBGene00018409
• Length: 368
• Species: Caenorhabditis elegans
• Alignment Length: 342
• Identity: 190/342 - (55%)
• Similarity: 258/342 - (75%)
• Gaps: 15/342 - (4%)

  Fly     4 TSGPAVRMPWVEKYRPSGLDDLISHEEIISTITRFISRKQLPHLLFYGPPGTGKTSTILACARQL 68
            |:..|..:|||||||||.||:|::||:|:.|:|:||..:.|||||||||||||||:|:||.|||:
 Worm    22 TTTTASNLPWVEKYRPSKLDELVAHEQIVKTLTKFIENRTLPHLLFYGPPGTGKTTTVLAAARQM 86

  Fly    69 YSPQQFKSMVLELNASDDRGIGIVRGQILNFASTRTI--FCDT-------FKLIILDEADAMTND 124
            |||.:..||||||||||:|||.:||..|:|||.|:.:  |..:       |||:|||||||||.|
 Worm    87 YSPTKMASMVLELNASDERGIDVVRNTIVNFAQTKGLQAFSTSSNTGTVPFKLVILDEADAMTKD 151

  Fly   125 AQNALRRIIEKYTDNVRFCVICNYLSKIIPALQSRCTRFRFAPLSQDQMMPRLEKIIEAEAVQIT 189
            |||||||:|||||||||||:|||||:.|:||:||||||||||||.|..::||||.|:|.|.:::|
 Worm   152 AQNALRRVIEKYTDNVRFCIICNYLASIVPAIQSRCTRFRFAPLDQKLIVPRLEYIVETEQLKMT 216

  Fly   190 EDGKRALLTLAKGDMRKVLNVLQSTVMAFDTVNEDNVYMCVGYPLRQDIEQILKALLSGSSLEDS 254
            .|||.|||.::|||||.|:|.||||.|:||||:|:.||.|:|.|..:::::::|.||:..| :..
 Worm   217 PDGKDALLIVSKGDMRTVINTLQSTAMSFDTVSENTVYQCIGQPTPKEMKEVVKTLLNDPS-KKC 280

  Fly   255 FKTVESAKYARGLALEDIITELHLFVMRLELPMSVMNKLIVKLAQIEERLAKGCTEVAQTAALVA 319
            ..|:::..:..|.||:|:||.||.||..|::|...|:.:|..|.::||.|:.||:...|.||:||
 Worm   281 MNTIQTKLFENGYALQDVITHLHDFVFTLDIPDEAMSAIITGLGEVEENLSTGCSNETQLAAVVA 345

  Fly   320 AFF----IC-RDMVSME 331
            |||    :| ::|.::|
 Worm   346 AFFEAKRLCVKEMKNLE 362

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC3	NP_609399.1	rfc	12..321	CDD:234763	182/317 (57%)
F44B9.8	NP_498750.2	rfc	27..340	CDD:234763	177/313 (57%)
		AAA	44..194	CDD:99707	100/149 (67%)
		Rep_fac_C	278..340	CDD:285713	21/61 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160159158
Domainoid	1	1.000	183	1.000	Domainoid score	I2052
eggNOG	1	0.900	-	-		E1_COG0470
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H6730
Inparanoid	1	1.050	385	1.000	Inparanoid score	I1165
Isobase	1	0.950	-	0	Normalized mean entropy	S415
OMA	1	1.010	-	-		QHG53599
OrthoDB	1	1.010	-	-		D1071197at2759
OrthoFinder	1	1.000	-	-		FOG0000505
OrthoInspector	1	1.000	-	-		oto19228
orthoMCL	1	0.900	-	-		OOG6_100321
Panther	1	1.100	-	-	LDO	PTHR11669
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1089
SonicParanoid	1	1.000	-	-		X3552
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	18	17.750