Protein Alignment RfC3 and mdt-30

DIOPT Version :10

• Sequence 1: NP_609399.1
• Gene: RfC3 / 34423
• FlyBaseID: FBgn0032244
• Length: 332
• Species: Drosophila melanogaster
• Sequence 2: NP_498749.1
• Gene: mdt-30 / 176130
• WormBaseID: WBGene00004125
• Length: 466
• Species: Caenorhabditis elegans
• Alignment Length: 218
• Identity: 40/218 - (18%)
• Similarity: 70/218 - (32%)
• Gaps: 82/218 - (37%)

  Fly   117 EADAMTNDAQNALRRIIEKYTDNVRFCV--IC--------------NYLSKIIPALQSRCTRFRF 165
            |..|...:.|:.:|...:|.|:..::..  :|              :|||.|:..:..|
 Worm   255 ETMAQQTEPQSHIRESPQKETNLEKYSTGELCLYGRELVNDLNVKTSYLSTILKKVMER------ 313

  Fly   166 APLSQDQMMPRLEKIIEAEAVQITEDGKRALLTLAKGDMRKVLNVLQSTVMAFDTVNEDNVYMCV 230
            .||:|.:           ....:.:..|.||..::  |:|:::...:.....
 Worm   314 KPLNQGE-----------NPNDLADQCKNALQRMS--DIRQIIEKRREPTWK------------- 352

  Fly   231 GYPLRQDIEQILKALLSGSSLEDSFKTVESAKYARGLALED----------------------II 273
                |...|..::.:|..|.|:   |.::..:..|...||.                      |.
 Worm   353 ----RMTGEDYIELMLDDSELK---KPMDEERQKRRAELEQRFAIVISKTPPVEGHIWYQGKWIS 410

  Fly   274 TELHLFVMRLELPMSVMNKLIVK 296
            .|||...|:.|     .||.|||
 Worm   411 EELHKKYMQFE-----ANKEIVK 428

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC3	NP_609399.1	rfc	12..321	CDD:234763	40/218 (18%)
mdt-30	NP_498749.1	None