Protein Alignment RfC3 and hpr-17

DIOPT Version :9

• Sequence 1: NP_609399.1
• Gene: RfC3 / 34423
• FlyBaseID: FBgn0032244
• Length: 332
• Species: Drosophila melanogaster
• Sequence 2: NP_496793.1
• Gene: hpr-17 / 174958
• WormBaseID: WBGene00001998
• Length: 514
• Species: Caenorhabditis elegans
• Alignment Length: 364
• Identity: 77/364 - (21%)
• Similarity: 134/364 - (36%)
• Gaps: 91/364 - (25%)

  Fly    19 PSGLDDLISHEEIISTITRFI------SRKQLPHLLFYGPPGTGKTSTI-LACARQ-----LYSP 71
            |...|:|..|.:.|:.:..::      |.|||..:...||.|:||::|: :.|..|     .|||
 Worm    15 PRRRDELQIHNKKIAEVDHWLKNVFSESNKQLGVMYLTGPAGSGKSTTVEVMCTEQNIEIIEYSP 79

  Fly    72 QQFKSMVLELNASDD--------RGIGIVRGQILNFASTRTIFCDTFKLIILDE-ADAMTNDAQ- 126
            :...:...|....|.        |..|.:||..|.           .:|:::.| .|...:||:
 Worm    80 EYLHNEDFECEKPDFTQLRRFLLRRHGSLRGGGLK-----------KRLLLVTELPDQAYSDAEK 133

  Fly   127 --NALRRIIEKYTDNVRFC----VICNYLS---------KIIPALQSRCTRFRFAPLSQDQMMPR 176
              ..|..:::.....|.||    :.|..|:         .|:..:.:    ..|.|::...|...
 Worm   134 FREDLSEVLQHIWHPVIFCLTNSIACWNLNPDRLFTKDFNIMNGIDT----VTFNPVADSFMKKA 194

  Fly   177 LEKIIEAEAVQITEDGKRALLTLAKGDMRKVLNVLQSTVMAFDTVNED----NVYMCVGYPLRQD 237
            |.:.....:..:::.....:...|.||:|..:|:||...:.   .|.|    |..:|.....|::
 Worm   195 LVRASNCLSSPLSDAKLNVIGEEAGGDLRIAMNMLQMNSIG---PNADRRSGNSVICASKANREE 256

  Fly   238 IEQILKALLSGSSLEDSF-KTVESAKYARGLA----------LE----DIITELHLFVMRLELPM 287
            ...::..:|....:..:. |....:|..|..|          ||    ||||            |
 Worm   257 AFHMIGRILYAKRVNPNVPKPSRFSKRRRKSAPIPEPLVRTELEHDPTDIIT------------M 309

  Fly   288 SVM--NKLIVKLAQIEERLAKGCTEVAQTAALVAAFFIC 324
            |.|  .||:..|.|.|...   |:.:::...:...|.:|
 Worm   310 SSMTSEKLLDFLFQNEPIF---CSNISKYRYVAETFSMC 345

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC3	NP_609399.1	rfc	12..321	CDD:234763	75/359 (21%)
hpr-17	NP_496793.1	Rad17	15..375	CDD:251803	77/364 (21%)
		AAA_16	28..153	CDD:289934	31/135 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0470
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810