DRSC/TRiP Functional Genomics Resources

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Protein Alignment RfC3 and Gnf1

DIOPT Version :10

Sequence 1:NP_609399.1 Gene:RfC3 / 34423 FlyBaseID:FBgn0032244 Length:332 Species:Drosophila melanogaster
Sequence 2:XP_321857.6 Gene:Gnf1 / 1281887 VectorBaseID:AGAMI1_008516 Length:1053 Species:Anopheles gambiae


Alignment Length:309 Identity:72/309 - (23%)
Similarity:114/309 - (36%) Gaps:94/309 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 MPWVEKYRPSGLDDLISHEEIISTITRFI--------------------------SRKQLPHLLF 49
            |.|||||:||....:|......|.:.|..                          |.......|.
Mosquito   478 MAWVEKYKPSSTKQIIGQMGANSNVQRLTVWLSSWYKNNDGTKKHAKPNPWAKNDSGAAFKAALL 542

  Fly    50 YGPPGTGKTSTILACARQLYSPQQFKSMVLELNASDDRGIGIVR---GQILNFASTRTIF----- 106
            .||||.|||:|.....::|    .|.:  :|.||||.|...:::   .::||..|....|     
Mosquito   543 SGPPGVGKTTTATLVCKEL----GFDT--VEFNASDTRSKRLLKEEVSELLNSKSLAGYFGGRSE 601

  Fly   107 -CDTFKLIILDEADAMT-NDAQNALRRIIEKYTDNVRFCVICNYLSKIIPALQS---RCTRFRFA 166
             ..:..::::||.|.|. |:.:..::.:|....:: ...|||....:..|.::|   .|...|| 
Mosquito   602 KVSSKHVLLMDEVDGMAGNEDRGGMQELIALIKES-HIPVICMCNDRNHPKIRSLVNYCFDLRF- 664

  Fly   167 PLSQDQMMPRLEKIIEA-------EAVQITEDGKRALLTLAKGDMRKVLNVLQSTVMAFDTVNED 224
                  ..||:|:|..|       |.::::......::....||:|:.||.|             
Mosquito   665 ------NRPRVEQIKGAMMSVCFKEQLKLSPGVLEEIIAGTGGDVRQTLNHL------------- 710

  Fly   225 NVYMCVGYPLRQDIEQILKALLS-GSSLEDSFKTVESAKYARGLALEDI 272
                               ||.| |.|:..|. :|:|||.....|.:||
Mosquito   711 -------------------ALYSAGKSMAASL-SVDSAKKQADSAKKDI 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RfC3NP_609399.1 rfc 12..321 CDD:234763 71/308 (23%)
Gnf1XP_321857.6 None

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