Protein Alignment RfC3 and RfC38

DIOPT Version :10

• Sequence 1: NP_609399.1
• Gene: RfC3 / 34423
• FlyBaseID: FBgn0032244
• Length: 332
• Species: Drosophila melanogaster
• Sequence 2: XP_319799.4
• Gene: RfC38 / 1280005
• VectorBaseID: AGAMI1_000773
• Length: 358
• Species: Anopheles gambiae
• Alignment Length: 360
• Identity: 94/360 - (26%)
• Similarity: 160/360 - (44%)
• Gaps: 75/360 - (20%)

  Fly    13 WVEKYRPSGLDDLISHEEIISTITRFISRKQLPHLLFYGPPGTGKTSTILACARQLYSP--QQFK 75
            ||::|||..|..|..|:...|.:....|:...|||:||||.|.||.:.|:...|:||.|  ::.:
Mosquito     4 WVDRYRPRELAKLDYHKPQASQLINLCSQGDFPHLMFYGPSGAGKKTRIICLLRELYGPGVERLR 68

  Fly    76 SMV---------------------LELNASDDRGIGI-----VRGQILNFASTRTIFCD-----T 109
            :.|                     :|:|.||   :||     :...|...|.|:.|  |     .
Mosquito    69 NEVMNFTTPSNKKIEIMTVSSNYHIEVNPSD---VGIYDRVVITDMIKQIAQTQQI--DPSGQRE 128

  Fly   110 FKLIILDEADAMTNDAQNALRRIIEKYTDNVRFCVICNYLSKIIPALQSRCTRFRFAPLSQDQMM 174
            ||.|:|.|.|.:|.|||:||||.:|||....|..:..|..|:||||::|||...|.:..::|:::
Mosquito   129 FKTIVLSEVDELTKDAQHALRRTMEKYVATCRLILCVNSTSRIIPAVKSRCLGIRVSAPTEDEIV 193

  Fly   175 PRLEKIIEAEAVQITEDGKRALLTLAKGDMRKVLNVLQS-TVMAFD-TVNED------------- 224
            ..:..|.:.|.:.|..:....:...::.::|:.:..|:: .||.:. |.|::
Mosquito   194 SIMNSICKKENLHIPPELATRIAQKSERNLRRAILTLEACKVMQYPFTANQEIPDMDWQTYLKET 258

  Fly   225 -NVYMCVGYPLRQDI--EQILKALLSGSSLEDSFKTVESAKYARGLALEDIITELHLFVMRLELP 286
             |:.:....|.|.::  |::.:.|..|...:..||         ||        :.:.|...:
Mosquito   259 ANMIVQEQTPQRMEVVRERLYELLSQGIPPDIIFK---------GL--------VQILVKNCD-- 304

  Fly   287 MSVMNKLIVKLAQIEERLAKGCTEVAQTAALVAAF 321
            ||:..:.:......:.|:.:|...:....|.||.|
Mosquito   305 MSLKTQTLSFAGLYDHRMQRGSKHIFHLEAFVAQF 339

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC3	NP_609399.1	rfc	12..321	CDD:234763	93/358 (26%)
RfC38	XP_319799.4	rfc	3..345	CDD:234763	94/360 (26%)