Protein Alignment RfC3 and Rfc2

DIOPT Version :10

• Sequence 1: NP_609399.1
• Gene: RfC3 / 34423
• FlyBaseID: FBgn0032244
• Length: 332
• Species: Drosophila melanogaster
• Sequence 2: NP_446238.1
• Gene: Rfc2 / 116468
• RGDID: 621198
• Length: 349
• Species: Rattus norvegicus
• Alignment Length: 327
• Identity: 124/327 - (37%)
• Similarity: 198/327 - (60%)
• Gaps: 11/327 - (3%)

  Fly     2 SETSGPAVRMPWVEKYRPSGLDDLISHEEIISTITRFISRKQLPHLLFYGPPGTGKTSTILACAR 66
            |:|:| ...:||||||||..|::::.:|:.:|.:..|.....:|:::..||||||||::||..||
  Rat    23 SKTTG-HYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLAR 86

  Fly    67 QLYSPQQFKSMVLELNASDDRGIGIVRGQILNFASTR-TIFCDTFKLIILDEADAMTNDAQNALR 130
            .|..| ..|..|||||||:||||.:||.:|..||..: |:.....|:|||||||:||:.||.|||
  Rat    87 ALLGP-ALKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALR 150

  Fly   131 RIIEKYTDNVRFCVICNYLSKIIPALQSRCTRFRFAPLSQDQMMPRLEKIIEAEAVQITEDGKRA 195
            |.:|.|:...||.:.||...|||..:||||...|:..|:..|::.||..:||.|.|..|:||..|
  Rat   151 RTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQVLSRLMNVIEKEKVPYTDDGLEA 215

  Fly   196 LLTLAKGDMRKVLNVLQSTVMAFDTVNEDNVYMCVGYPLRQDIEQILKALLSGSSLEDSFKTVES 260
            ::..|:||||:.||.||||...|..:|.:||:.....|....::::::..:. :::::::| :.:
  Rat   216 IIFTAQGDMRQALNNLQSTFSGFGYINSENVFKVCDEPHPLLVKEMIQHCVD-ANIDEAYK-ILA 278

  Fly   261 AKYARGLALEDIITELHLFVMRLELPMSVMNKL--IVKLAQIEERLAKGCTEVAQTAALVAAFFI 323
            ..:..|.:.||:|.  ::|.:....||:...||  |.::.....::|:|...:.|.|.|:|.  :
  Rat   279 HLWHLGYSPEDVIG--NIFRVCKTFPMAEYLKLEFIKEIGYTHMKVAEGVNSLLQMAGLLAR--L 339

  Fly   324 CR 325
            |:
  Rat   340 CQ 341

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC3	NP_609399.1	rfc	12..321	CDD:234763	120/311 (39%)
Rfc2	NP_446238.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..27		2/3 (67%)
		PLN03025	31..343	CDD:178596	121/318 (38%)