Sequence 1: | NP_609399.1 | Gene: | RfC3 / 34423 | FlyBaseID: | FBgn0032244 | Length: | 332 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_663455.1 | Gene: | Rfc4 / 106344 | MGIID: | 2146571 | Length: | 364 | Species: | Mus musculus |
Alignment Length: | 321 | Identity: | 135/321 - (42%) |
---|---|---|---|
Similarity: | 193/321 - (60%) | Gaps: | 16/321 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 MPWVEKYRPSGLDDLISHEEIISTITRFISRKQLPHLLFYGPPGTGKTSTILACARQLYSPQQFK 75
Fly 76 SMVLELNASDDRGIGIVRGQILNFASTRTIF--------CDTFKLIILDEADAMTNDAQNALRRI 132
Fly 133 IEKYTDNVRFCVICNYLSKIIPALQSRCTRFRFAPLSQDQMMPRLEKIIEAEAVQITEDGKRALL 197
Fly 198 TLAKGDMRKVLNVLQST--VMAFDTVNEDNVYMCVGYPLRQDIEQILKALLSGSSLEDSFKTVES 260
Fly 261 AKYARGLALEDIITELHLFVMRLELPMSVMNKLIV--KLAQIEERLAKGCTEVAQTAALVA 319 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RfC3 | NP_609399.1 | rfc | 12..321 | CDD:234763 | 135/320 (42%) |
Rfc4 | NP_663455.1 | rfc | 39..354 | CDD:234763 | 134/318 (42%) |
AAA | 55..201 | CDD:99707 | 78/146 (53%) | ||
AAA_assoc_2 | 217..>267 | CDD:292811 | 14/49 (29%) | ||
Rep_fac_C | 285..354 | CDD:285713 | 20/71 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0470 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG53599 | |
OrthoDB | 1 | 1.010 | - | - | D1071197at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000505 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.830 |