DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Klp31E and Kif4b

DIOPT Version :9

Sequence 1:NP_001162935.1 Gene:Klp31E / 34422 FlyBaseID:FBgn0032243 Length:1048 Species:Drosophila melanogaster
Sequence 2:XP_017449986.2 Gene:Kif4b / 299255 RGDID:1564044 Length:1224 Species:Rattus norvegicus


Alignment Length:1187 Identity:336/1187 - (28%)
Similarity:534/1187 - (44%) Gaps:268/1187 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KDSSVRVAVRIRPQNSRELIDMCRICTTVTLGEPQIFLGSDKAFTFDYVFDTNSNQCDIYSDCVE 74
            |:..||||:|.||...:|:.:.|::|.:...|:||:.:|:||:||:|:|||.::.|.::::..|.
  Rat     6 KEIPVRVALRCRPLVPKEIGEGCQVCLSFVPGKPQVVIGTDKSFTYDFVFDPSTEQEEVFNTAVA 70

  Fly    75 KLVDSTLHGYNATVLAYGQTGSGKTYTMGTGFDHESESSDSVQLGIIPRAVRHIFSGIEQLEGSS 139
            .|:.....||||||||||||||||||:||..:  .:...|...:|:|||.::.:|..:|:...| 
  Rat    71 PLIKGIFKGYNATVLAYGQTGSGKTYSMGGAY--RANQEDEPTIGVIPRVIQLLFKEMEEKRDS- 132

  Fly   140 TSEHPAAGGSPQFSLAVQYIELYNEDIFDLL-DPFNKNSNFKIHEDASGQITISGASIKPIYQPH 203
                       :|:|.|.|:|:|||:|.||| ....|.|...|.||....|...|.:.|.:....
  Rat   133 -----------EFTLRVSYLEIYNEEILDLLCSSCEKASQIHIREDPKAGIKTVGLTEKTVSVAS 186

  Fly   204 DALKYLQQGALARTTASTKMNDQSSRSHALFTIFVRRQRLLTPSDNVPDNDLETLTSKFHFVDLA 268
            |.:..|:||..|||.|:|.||.|||||||:||:|:|:::....|        .:..||...||||
  Rat   187 DMVSCLEQGNNARTVAATAMNSQSSRSHAIFTVFIRQRKKTDKS--------SSFHSKLCLVDLA 243

  Fly   269 GSERLKRTQATGERAREGISINCGLLALGNCISALGDKSKRALHVPYRDSKLTRLLQDSLGGNSQ 333
            ||||.|:|:|.|:|.||||:||.|||.|||.|||||| .|:...||||||||||||||||||||.
  Rat   244 GSERQKKTKAEGDRLREGININRGLLCLGNVISALGD-GKKGSFVPYRDSKLTRLLQDSLGGNSH 307

  Fly   334 TLMIACVSPSDRDFMETLNTLKYANRARNIKNKVKINQDQSSRTISQLRREIAALQLELLEYKQG 398
            |||||||||:|....||||||:||:|||.|||:..||.|..:..::.|:.::..|::.||:...|
  Rat   308 TLMIACVSPADSSLEETLNTLRYADRARKIKNEPVINTDPQTAELTHLKHQVQQLRVLLLQAHGG 372

  Fly   399 KL--IVDCEGNTTISDTFNENKLLLSEIKRLQQRLKSLQSTIATLTQR-------NADLKTNL-- 452
            .|  .:..|.:.::.....:|:.|..|.::|...|.......|.:.:|       |..|.|.|  
  Rat   373 SLPGSIIAEPSESLQSLMEKNQSLGEENEKLSHALSEAAGQTAQMLERIILTEQANEQLNTKLQE 437

  Fly   453 ---------DLNKWTS--DDNSDVEIAKVVGQYMLEIEELQTKLIESEEHRKQMEIKATTSPRNA 506
                     ||.|.|.  :|...:|..:::......:..|..:.:.:.|...::|.:...||::.
  Rat   438 LSDHVACKVDLQKLTETLEDQELIEKIEIIRSLQQAVIHLSDENVVATESAMELETQVAISPKSR 502

  Fly   507 KPVYDSDIITKAKKDLERERELLMSRSLPGIQNQNVSSEETEVASSDSEAEEVVKDLEAIDNDIE 571
            :   .||.:|                              |:.|...:   ::.|:|..::..:.
  Rat   503 R---SSDALT------------------------------TQHALRQA---QMSKELTELNKALA 531

  Fly   572 MRTKLIEQLELTNSRYEQMRTHYEEKLSVLYCKIENTQKERDDVLANMTTSVSTPSKDSL----K 632
            ::..|..::.....:.:.:...||..:..|..::.:.|||::.:|.::..:....::..|    :
  Rat   532 VKEALARKITFNGGQLQPIHCQYEVNIRSLESEVASLQKEKEQLLLDLQLAKKDANQAKLGEHRR 596

  Fly   633 KVKTDYESKISHMQTEIRKLQNAQREHIRSKQQLKSHEVRIGTLRNELNELKFAKVKLMKKMSQQ 697
            |...:.|::|:    :::|..:.|.:.::.|:   |.|..:..|..|:..:|..:|:||::|.:.
  Rat   597 KCLQELEAQIA----DLKKKLSEQSKLLKLKE---STENTVSKLTLEIQMMKTQRVQLMRQMKED 654

  Fly   698 SNRHKQEESRKSKEIAQLLKEQRRQKNAVLTLEAKVSAKEQILKRKTEEVIALRK---------- 752
            :.:.:|.:.:|.||:.||.::.|:::..:|.||.....:..:|:|||||..|..|          
  Rat   655 AEKSRQWKQQKDKEVIQLREQDRKRRYELLKLERDFQKQSNVLRRKTEEAAAANKRLKDALQKQR 719

  Fly   753 ---------SQRGKSGQRAPAH--LTSKIATLDGFSTRSARHRWENLY--RNIL----------- 793
                     ..||..|..|...  |:::|..:  .||...:|...:|.  |.||           
  Rat   720 DAADKRKETQNRGLEGTEARVKNWLSNEIEVM--VSTEDVKHHLNDLLEERKILALDMAQLKENK 782

  Fly   794 ----------------------HAARNRQLITQ----LEKELERLILEREDLSRELNIMENGQTA 832
                                  |::.....||:    ||.|:|....:..||.::|...|:....
  Rat   783 EPGENPPLKLQKWTFASDEVCGHSSEPEDSITKQIRSLEAEMELRNAQIADLQQKLLDAESEDRP 847

  Fly   833 DRQTDEFNEVDNLKTNISYIQENIEHVQQAIMEFE-DTKDTVQSHVNKIQSLLDE----VSTVAE 892
            .|..:....|...|..:.|:...:...:..:.|.| :.|.:..||....:.||:|    |...||
  Rat   848 KRHWESIATVLEAKCALKYLVGEVVSSKLQVSELESNLKQSQASHSKTQKMLLEEQSHLVQVEAE 912

  Fly   893 AKFILQKFSDTAIVMSCNLAIAESHLQEKE-SLLKEVKQE-----------SGIQQQIL------ 939
            .|..|.|              ||...|||| .||.:::|.           ||.:||:|      
  Rat   913 WKAELSK--------------AEQKHQEKELYLLSQLQQSQMAEQRLEVSVSGKEQQLLSTLQCQ 963

  Fly   940 --------------QHFLSQNSNVHIADIFDSLNLKGSNIASSVNPGSQKSLISNATYD----IP 986
                          |..|.:|..:.                       ||..:...|.|    :|
  Rat   964 EDQFRKMQELCEQNQQLLQENEAIR-----------------------QKLSLFQGTKDQKSHLP 1005

  Fly   987 QDD---KNSEFHQVEMRRTTSR---------------------SPSPLGNSDPFDKSPKVRRRTA 1027
            :||   .:|.|:.:......||                     |.|...:.|..||..|.|:.  
  Rat  1006 RDDLQSPDSSFNYIPPPPKASRVRGKFLDQSMDIDDLNSYPEYSMSESEDGDGHDKEWKPRKL-- 1068

  Fly  1028 KRQDLLFGDTELSEQTF 1044
                     .::|.:||
  Rat  1069 ---------AKVSRKTF 1076

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp31ENP_001162935.1 KISc_KIF4 12..364 CDD:276823 171/352 (49%)
KISc 13..370 CDD:214526 174/357 (49%)
KASH_CCD 409..589 CDD:291334 30/199 (15%)
RasGAP <685..750 CDD:295371 20/64 (31%)
Kif4bXP_017449986.2 KISc_KIF4 8..338 CDD:276823 171/352 (49%)
Smc <370..742 CDD:224117 78/414 (19%)
SMC_prok_B <594..923 CDD:274008 77/351 (22%)
SET 1074..>1113 CDD:394802 2/3 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D74122at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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