DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5355 and ptrB

DIOPT Version :10

Sequence 1:NP_609397.2 Gene:CG5355 / 34421 FlyBaseID:FBgn0032242 Length:756 Species:Drosophila melanogaster
Sequence 2:NP_416359.1 Gene:ptrB / 946358 ECOCYCID:EG11004 Length:686 Species:Escherichia coli


Alignment Length:763 Identity:178/763 - (23%)
Similarity:310/763 - (40%) Gaps:178/763 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 AEDFHGTQIKDVYRWLEDPDSTETE--EFVNAQNS----------------------------IS 94
            |...||....|.|.||.|...::.|  :::..:||                            :|
E. coli    11 AMTLHGDTRIDNYYWLRDDTRSQPEVLDYLQQENSYGHRVMASQQALQDRILKEIIDRIPQREVS 75

  Fly    95 RPFLENGEEWKKLNTKLTKLWNYPKYGCPMRYGNYYYYFMNTGLQNQSVMYQQKSLGDE--SESK 157
            .|:::||..::.:.          :.||                  :..:||::|...|  .|.:
E. coli    76 APYIKNGYRYRHIY----------EPGC------------------EYAIYQRQSAFSEEWDEWE 112

  Fly   158 VFLDPN--------------TLSEDGTIALTQKAFSEDGKYMA---YGLSESGSDWIKILIRDAE 205
            ..||.|              .::.|.||    .|.:||  :::   ||          |..|:.|
E. coli   113 TLLDANKRAAHSEFYSMGGMAITPDNTI----MALAED--FLSRRQYG----------IRFRNLE 161

  Fly   206 TGKDLSEVLEKVKFSEISWTKDNKGFFYGR------YPDQDGKTDGSETKQNENQKLYYHRVGES 264
            ||....|:|:.|:.|.: |..|:..|:|.|      .|.|                ::.|.:|..
E. coli   162 TGNWYPELLDNVEPSFV-WANDSWIFYYVRKHPVTLLPYQ----------------VWRHAIGTP 209

  Fly   265 QDKDTLVVEFPEEPSW-RIQSTVSDCGKYLIL----AIVKDCRDNIVFYADLTPGAEITSKLNVK 324
            ..:|.|:.|..::..: .:..|.|.  .|:::    |...:.|......||..|...:..:    
E. coli   210 ASQDKLIYEEKDDTYYVSLHKTTSK--HYVVIHLASATTSEVRLLDAEMADAEPFVFLPRR---- 268

  Fly   325 KIVEKFEADYDY-ITNEGSKIFFRTNKNAPNYQVIAIDFNNSAEDKWETLIAEHKSDVL------ 382
                   .|::| :.:...:.:.|:|::..|:.:......:  |.:||.||...::.:|      
E. coli   269 -------KDHEYSLDHYQHRFYLRSNRHGKNFGLYRTRMRD--EQQWEELIPPRENIMLEGFTLF 324

  Fly   383 -DWVKCVDNDKLLVCYIRDVKSVLQVNSLKDGTLLREFDLDIG--TIVGTSGEKKYSEIFYNFSS 444
             ||:...:..       |.:.|:.|:|......:...|| |..  |.:..:.|.:.:.:.|.:||
E. coli   325 TDWLVVEERQ-------RGLTSLRQINRKTREVIGIAFD-DPAYVTWIAYNPEPETARLRYGYSS 381

  Fly   445 FLNPGSIYRYDFKTPDKSPSVFREIK-LNLEGFRREDYAVEQIFYKSKDGTKVPMFII-RKKRDS 507
            ...|.:::..|..|.::     |.:| ..:.||...:|..|.::..::||.:||:.:: .:|...
E. coli   382 MTTPDTLFELDMDTGER-----RVLKQTEVPGFYAANYRSEHLWIVARDGVEVPVSLVYHRKHFR 441

  Fly   508 VEPRPCLLYGYGGFNISMLPSFGLSGLMFIDTFDGVLAYPNLRGGGEYGEKWHNGGRLLNKQNVF 572
            ....|.|:||||.:..|:...|..|.|..:|. ..|.|..::|||||.|::|:..|:.|.|:|.|
E. coli   442 KGHNPLLVYGYGSYGASIDADFSFSRLSLLDR-GFVYAIVHVRGGGELGQQWYEDGKFLKKKNTF 505

  Fly   573 DDFQAAAEYLIENKYTTKDRLAIQGGSNGGLLVGSCINQRPDLFGAAVAQVGVMDML-----RFH 632
            :|:..|.:.|::..|.:.......|||.||:|:|..|||||:||...:|||..:|::     ...
E. coli   506 NDYLDACDALLKLGYGSPSLCYAMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESI 570

  Fly   633 KFTIGHAWCSDYGNPSEKEHFDNLYKFSPLHNVHTPKGAETEYPSTLILTADHDDRVSPLHSLKF 697
            ..|.|.  ..::|||.:.::::.:..:||..||     ....||..|:.|..||.:|......|:
E. coli   571 PLTTGE--FEEWGNPQDPQYYEYMKSYSPYDNV-----TAQAYPHLLVTTGLHDSQVQYWEPAKW 628

  Fly   698 IAALQEAVRDSEFQKNPVLLRVYQKAGHGAGKPTSKRIEEATDILTFL 745
            :|.|:|...|...    :||.....:|||......|..|.......||
E. coli   629 VAKLRELKTDDHL----LLLCTDMDSGHGGKSGRFKSYEGVAMEYAFL 672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5355NP_609397.2 PreP 45..749 CDD:441114 178/763 (23%)
ptrBNP_416359.1 PRK10115 1..686 CDD:182247 178/763 (23%)

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