DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS27A and Ubqln4

DIOPT Version :9

Sequence 1:NP_476778.1 Gene:RpS27A / 34420 FlyBaseID:FBgn0003942 Length:156 Species:Drosophila melanogaster
Sequence 2:NP_277068.1 Gene:Ubqln4 / 94232 MGIID:2150152 Length:596 Species:Mus musculus


Alignment Length:92 Identity:30/92 - (32%)
Similarity:46/92 - (50%) Gaps:19/92 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSD--TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63
            :::.|||...|.   |:...|  :::..|.:|..:.....||..||||||.|:||.|||.:.|:.
Mouse    13 IRVTVKTPKDKE---EIVICDQASVKEFKEEISRRFKAQQDQLVLIFAGKILKDGDTLSQHGIKD 74

  Fly    64 ESTLHLVLRLRGGAKKRKKKNYSTPKK 90
            ..|:|||::              ||:|
Mouse    75 GLTVHLVIK--------------TPQK 87

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS27ANP_476778.1 Ubl_ubiquitin 1..76 CDD:340501 27/76 (36%)
Ribosomal_S27 103..147 CDD:396259
Ubqln4NP_277068.1 UBQ 13..83 CDD:214563 27/72 (38%)
hPLIC_N 13..83 CDD:176403 27/72 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..148
STI1 187..224 CDD:128966
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 297..361
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 482..528
UBA_PLICs 553..592 CDD:270582
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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