DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS27A and ZFAND4

DIOPT Version :9

Sequence 1:NP_476778.1 Gene:RpS27A / 34420 FlyBaseID:FBgn0003942 Length:156 Species:Drosophila melanogaster
Sequence 2:XP_016872420.1 Gene:ZFAND4 / 93550 HGNCID:23504 Length:741 Species:Homo sapiens


Alignment Length:223 Identity:49/223 - (21%)
Similarity:72/223 - (32%) Gaps:110/223 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD-----------------------QQR 42
            |::|::||||....|.|.|.:|:.:|||||:..| :|.|                       .::
Human    84 MELFIETLTGTCFELRVSPFETVISVKAKIRRLE-VPTDDPLRKMAEYLDSSRVEVWEKTSCSKQ 147

  Fly    43 LIF----AGKQLE--------DG--RTLSDYNIQKESTLHLVLRLRGGAK--------------- 78
            :.|    .|.||.        ||  ..|||.:.:.:..|| |||.:|..:               
Human   148 VTFLVYQEGDQLNFFPAVDRGDGTLTPLSDSSKKIDFHLH-VLRRKGEHRMSYCFLCSGGSMYNS 211

  Fly    79 ------------------------------KRKKKNYSTPKKIKHKRKKVKLAVLKYYKVDENGK 113
                                          |.|.||.:..||.|           |..|:..:..
Human   212 DTDEDEETEPSSSGQQIIENSITMNKMKLLKAKMKNMNLSKKPK-----------KAVKIKPHPP 265

  Fly   114 I-------------HRLRRECP--GENC 126
            :             |||.|..|  |::|
Human   266 VAPRPSSGSTAPSRHRLLRVLPNIGQSC 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS27ANP_476778.1 Ubl_ubiquitin 1..76 CDD:340501 32/111 (29%)
Ribosomal_S27 103..147 CDD:396259 9/39 (23%)
ZFAND4XP_016872420.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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