Protein Alignment RpS27A and RAD23B

DIOPT Version :9

• Sequence 1: NP_476778.1
• Gene: RpS27A / 34420
• FlyBaseID: FBgn0003942
• Length: 156
• Species: Drosophila melanogaster
• Sequence 2: NP_001185439.1
• Gene: RAD23B / 844304
• AraportID: AT1G79650
• Length: 395
• Species: Arabidopsis thaliana
• Alignment Length: 74
• Identity: 30/74 - (40%)
• Similarity: 42/74 - (56%)
• Gaps: 3/74 - (4%)

  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLSDYNIQ 62
            |::.||||.|....:.|.|||||..||..|:|.:|   .|..||.||..||.|:|..:|.:..:.
plant     1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKVT 65

  Fly    63 KESTLHLVL 71
            :|..|.::|
plant    66 EEGFLVVML 74

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RpS27A	NP_476778.1	Ubl_ubiquitin	1..76	CDD:340501	30/74 (41%)
		Ribosomal_S27	103..147	CDD:396259
RAD23B	NP_001185439.1	rad23	1..392	CDD:273167	30/74 (41%)
		RAD23_N	1..78	CDD:176400	30/74 (41%)
		UBA1_Rad23_plant	166..215	CDD:270562
		XPC-binding	268..323	CDD:286376
		UBA2_RAD23_plant	347..389	CDD:270565

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5272
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810