DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS27A and UBQ14

DIOPT Version :10

Sequence 1:NP_476778.1 Gene:RpS27A / 34420 FlyBaseID:FBgn0003942 Length:156 Species:Drosophila melanogaster
Sequence 2:NP_849292.1 Gene:UBQ14 / 828148 AraportID:AT4G02890 Length:305 Species:Arabidopsis thaliana


Alignment Length:76 Identity:73/76 - (96%)
Similarity:75/76 - (98%) Gaps:0/76 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            ||||||||||||||||||.||||:||||||||||||||||||||||||||||||||:||||||||
plant     1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 65

  Fly    66 TLHLVLRLRGG 76
            |||||||||||
plant    66 TLHLVLRLRGG 76

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS27ANP_476778.1 Ubl_ubiquitin 1..76 CDD:340501 71/74 (96%)
Ribosomal_S27 103..147 CDD:460261
UBQ14NP_849292.1 Ubl_ubiquitin 1..76 CDD:340501 71/74 (96%)
Ubl_ubiquitin 77..152 CDD:340501 73/76 (96%)
Ubl_ubiquitin 153..228 CDD:340501
Ubl_ubiquitin 229..304 CDD:340501
Blue background indicates that the domain is not in the aligned region.

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