DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS27A and AT7SL-1

DIOPT Version :9

Sequence 1:NP_476778.1 Gene:RpS27A / 34420 FlyBaseID:FBgn0003942 Length:156 Species:Drosophila melanogaster
Sequence 2:NP_192206.1 Gene:AT7SL-1 / 828121 AraportID:AT4G02970 Length:270 Species:Arabidopsis thaliana


Alignment Length:98 Identity:30/98 - (30%)
Similarity:52/98 - (53%) Gaps:3/98 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            |.:::.|.||.:.::.::..:|:..:|.||:..:|||..:|.|...||.|||.....||.|..||
plant     1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYMILFES 65

  Fly    66 TLHLVLRLRGGA-KKRKKKNYSTPKKIKHKRKK 97
              .|:||:...| ..:..:.....|:|..|:::
plant    66 --RLLLRISPDADPNQSNEQTEQSKQIDDKKQE 96

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS27ANP_476778.1 Ubl_ubiquitin 1..76 CDD:340501 26/74 (35%)
Ribosomal_S27 103..147 CDD:396259
AT7SL-1NP_192206.1 UBQ 1..69 CDD:214563 24/69 (35%)
ubiquitin 7..74 CDD:278661 25/68 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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