DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS27A and UBQ6

DIOPT Version :9

Sequence 1:NP_476778.1 Gene:RpS27A / 34420 FlyBaseID:FBgn0003942 Length:156 Species:Drosophila melanogaster
Sequence 2:NP_001189768.1 Gene:UBQ6 / 819323 AraportID:AT2G47110 Length:157 Species:Arabidopsis thaliana


Alignment Length:152 Identity:128/152 - (84%)
Similarity:139/152 - (91%) Gaps:0/152 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            ||||||||||||||||||.||||:||||||||||||||||||||||||||||||||:||||||||
plant     1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 65

  Fly    66 TLHLVLRLRGGAKKRKKKNYSTPKKIKHKRKKVKLAVLKYYKVDENGKIHRLRRECPGENCGAGV 130
            ||||||||||||||||||.|:.|||||||.||||||||::||||.:||:.|||:|||...||||.
plant    66 TLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKECPNATCGAGT 130

  Fly   131 FMAAHEDRHYCGKCNLTFVFSK 152
            |||:|.||||||||.||:|:.|
plant   131 FMASHFDRHYCGKCGLTYVYQK 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS27ANP_476778.1 Ubl_ubiquitin 1..76 CDD:340501 71/74 (96%)
Ribosomal_S27 103..147 CDD:396259 29/43 (67%)
UBQ6NP_001189768.1 Ubl_ubiquitin 1..76 CDD:340501 71/74 (96%)
Ribosomal_S27 103..147 CDD:396259 29/43 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 138 1.000 Domainoid score I1562
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37715
Inparanoid 1 1.050 267 1.000 Inparanoid score I936
OMA 1 1.010 - - QHG53710
OrthoDB 1 1.010 - - D1536766at2759
OrthoFinder 1 1.000 - - FOG0001906
OrthoInspector 1 1.000 - - otm2700
orthoMCL 1 0.900 - - OOG6_101107
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1259
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.740

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