DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS27A and ubl7b

DIOPT Version :9

Sequence 1:NP_476778.1 Gene:RpS27A / 34420 FlyBaseID:FBgn0003942 Length:156 Species:Drosophila melanogaster
Sequence 2:XP_005173742.1 Gene:ubl7b / 393331 ZFINID:ZDB-GENE-040426-1334 Length:371 Species:Danio rerio


Alignment Length:81 Identity:22/81 - (27%)
Similarity:34/81 - (41%) Gaps:20/81 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 EPSDT------IENVK--AKIQDKEGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
            ||.|.      :..:|  ..:|..:.:| ||....:..|..|:|..||..|.|:..||||::   
Zfish    26 EPGDVHPGGYQVSTLKQLISVQLSDSLPDPDLIDFVHCGCVLKDDLTLDSYGIKSGSTLHII--- 87

  Fly    74 RGGAKKRKKKNYSTPK 89
                    ||.:..|:
Zfish    88 --------KKTWPEPE 95

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS27ANP_476778.1 Ubl_ubiquitin 1..76 CDD:340501 19/66 (29%)
Ribosomal_S27 103..147 CDD:396259
ubl7bXP_005173742.1 BMSC_UbP_N 15..89 CDD:176410 19/73 (26%)
Herpes_capsid <232..300 CDD:283714
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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