Protein Alignment RpS27A and Rad23a

DIOPT Version :9

• Sequence 1: NP_476778.1
• Gene: RpS27A / 34420
• FlyBaseID: FBgn0003942
• Length: 156
• Species: Drosophila melanogaster
• Sequence 2: XP_006255338.1
• Gene: Rad23a / 361381
• RGDID: 1309899
• Length: 363
• Species: Rattus norvegicus
• Alignment Length: 78
• Identity: 26/78 - (33%)
• Similarity: 47/78 - (60%)
• Gaps: 4/78 - (5%)

  Fly     3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLSDYNI-QK 63
            |.:|||..:|..:.:||.:|::.:|.||:.::|   .|...|:||:|||.|.|...:.:|:| :|
  Rat     5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDIPIKEYHIDEK 69

  Fly    64 ESTLHLVLRLRGG 76
            ...:.:|.:.:.|
  Rat    70 NFVVVMVTKAKAG 82

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RpS27A	NP_476778.1	Ubl_ubiquitin	1..76	CDD:340501	25/76 (33%)
		Ribosomal_S27	103..147	CDD:396259
Rad23a	XP_006255338.1	rad23	3..361	CDD:273167	26/78 (33%)
		RAD23_N	3..80	CDD:176400	25/74 (34%)
		UBA1_Rad23	162..201	CDD:270560
		XPC-binding	232..287	CDD:286376
		UBA2_HR23A	319..359	CDD:270610

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5272
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810