Protein Alignment RpS27A and Ubd

DIOPT Version :9

• Sequence 1: NP_476778.1
• Gene: RpS27A / 34420
• FlyBaseID: FBgn0003942
• Length: 156
• Species: Drosophila melanogaster
• Sequence 2: NP_445751.2
• Gene: Ubd / 29168
• RGDID: 69418
• Length: 161
• Species: Rattus norvegicus
• Alignment Length: 67
• Identity: 25/67 - (37%)
• Similarity: 38/67 - (56%)
• Gaps: 0/67 - (0%)

  Fly    10 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74
            |:...|.|..|.::..||..|::...:||.:|.:...||:||||:.::||||:..|.|.|.....
  Rat    95 GQRHLLRVRRSSSVAQVKEMIENVTAVPPKKQFVNCNGKRLEDGKIMADYNIKSGSLLFLTAHCI 159

  Fly    75 GG 76
            ||
  Rat   160 GG 161

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RpS27A	NP_476778.1	Ubl_ubiquitin	1..76	CDD:340501	23/65 (35%)
		Ribosomal_S27	103..147	CDD:396259
Ubd	NP_445751.2	UBQ	8..75	CDD:214563
		UBQ	17..75	CDD:294102
		UBQ	92..154	CDD:214563	22/58 (38%)
		ubiquitin	95..154	CDD:278661	22/58 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5272
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900