DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS27A and Ubl4a

DIOPT Version :10

Sequence 1:NP_476778.1 Gene:RpS27A / 34420 FlyBaseID:FBgn0003942 Length:156 Species:Drosophila melanogaster
Sequence 2:NP_663380.1 Gene:Ubl4a / 27643 MGIID:95049 Length:157 Species:Mus musculus


Alignment Length:127 Identity:43/127 - (33%)
Similarity:69/127 - (54%) Gaps:12/127 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            ||:.||.|.|:..:|:|...:.:..:|..:.||..:|..||||:|.||.|.|.:.||||||...|
Mouse     1 MQLTVKALQGRECSLQVAEDELVSTLKHLVSDKLNVPVRQQRLLFKGKALADEKRLSDYNIGPNS 65

  Fly    66 TLHLVLR------LRGGAKKRKKKNYSTPKKIKHKRKKVKLAVLKYYKV-DENGKIHRLRRE 120
            .|:||::      |..|:..|...:.:||  |.....||   :.:::.| |.:..:.:|:|:
Mouse    66 KLNLVVKPLEKVLLEEGSAHRLVDSPATP--IWQLISKV---LARHFSVADASRVLEQLQRD 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS27ANP_476778.1 Ubl_ubiquitin 1..76 CDD:340501 32/80 (40%)
Ribosomal_S27 103..147 CDD:460261 4/19 (21%)
Ubl4aNP_663380.1 Ubl_UBL4A_like 1..72 CDD:340505 31/70 (44%)
Tugs 96..142 CDD:465528 6/30 (20%)
Required and sufficient for interaction with BAG6. /evidence=ECO:0000250|UniProtKB:P11441 96..138 6/30 (20%)

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