DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS27A and Oas1a

DIOPT Version :9

Sequence 1:NP_476778.1 Gene:RpS27A / 34420 FlyBaseID:FBgn0003942 Length:156 Species:Drosophila melanogaster
Sequence 2:XP_006530393.2 Gene:Oas1a / 246730 MGIID:2180860 Length:381 Species:Mus musculus


Alignment Length:103 Identity:26/103 - (25%)
Similarity:42/103 - (40%) Gaps:36/103 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 QDKEGIP-PDQQRL----IFAGKQLEDGRTLSDYNIQK--ESTLHLVLRLRGGAKKRKKKNYSTP 88
            ::|.|.| |.|..|    :||.:|   |....::|..:  .:.|.||:            ||   
Mouse   221 KEKLGKPLPPQYALELLTVFAWEQ---GNGCYEFNTAQGFRTVLELVI------------NY--- 267

  Fly    89 KKIKHKRKKVKLAVLKYY--KVDENGK-IHR-LRRECP 122
                   :.:::...|||  :..|..| :|| ||:..|
Mouse   268 -------QHLRIYWTKYYDFQHQEVSKYLHRQLRKARP 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS27ANP_476778.1 Ubl_ubiquitin 1..76 CDD:340501 14/51 (27%)
Ribosomal_S27 103..147 CDD:396259 10/24 (42%)
Oas1aXP_006530393.2 NT_2-5OAS_ClassI-CCAase 29..212 CDD:143390
OAS1_C 165..348 CDD:402171 26/103 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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