DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS27A and Oasl2

DIOPT Version :9

Sequence 1:NP_476778.1 Gene:RpS27A / 34420 FlyBaseID:FBgn0003942 Length:156 Species:Drosophila melanogaster
Sequence 2:NP_035984.2 Gene:Oasl2 / 23962 MGIID:1344390 Length:508 Species:Mus musculus


Alignment Length:68 Identity:22/68 - (32%)
Similarity:39/68 - (57%) Gaps:0/68 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 67
            :|||...|::....::|.|||.::|.||:|..|...:.|.|:...::|||..:|.:..|:...|:
Mouse   437 VFVKYPGGQSKPFTIDPDDTILDLKEKIEDAGGPCAEDQVLLLDDEELEDDESLKELEIKDCDTI 501

  Fly    68 HLV 70
            .|:
Mouse   502 ILI 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS27ANP_476778.1 Ubl_ubiquitin 1..76 CDD:340501 22/68 (32%)
Ribosomal_S27 103..147 CDD:396259
Oasl2NP_035984.2 NT_2-5OAS_ClassI-CCAase 29..214 CDD:143390
OAS1_C 170..352 CDD:371041
Ubl1_OASL 355..428 CDD:340509
Ubiquitin_like_fold 434..505 CDD:391949 22/68 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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