DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS27A and Oasl1

DIOPT Version :9

Sequence 1:NP_476778.1 Gene:RpS27A / 34420 FlyBaseID:FBgn0003942 Length:156 Species:Drosophila melanogaster
Sequence 2:NP_001346874.1 Gene:Oasl1 / 231655 MGIID:2180849 Length:511 Species:Mus musculus


Alignment Length:77 Identity:27/77 - (35%)
Similarity:41/77 - (53%) Gaps:0/77 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            :|:|||...|::....:.|.|.:.|:|.:|:|::|:...:|||.|.|..|||......|.||...
Mouse   430 IQVFVKNPDGRSHAYAIHPLDYVLNLKQQIEDRQGLRCQEQRLEFQGHILEDWFDFKSYGIQDSV 494

  Fly    66 TLHLVLRLRGGA 77
            |:.|.....|.|
Mouse   495 TVILSKTTEGAA 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS27ANP_476778.1 Ubl_ubiquitin 1..76 CDD:340501 25/74 (34%)
Ribosomal_S27 103..147 CDD:396259
Oasl1NP_001346874.1 NT_2-5OAS_ClassI-CCAase 29..208 CDD:143390
OAS1_C 165..347 CDD:313619
UBQ 350..429 CDD:320785
ubiquitin 432..498 CDD:306702 23/65 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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