DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS27A and Gm4802

DIOPT Version :9

Sequence 1:NP_476778.1 Gene:RpS27A / 34420 FlyBaseID:FBgn0003942 Length:156 Species:Drosophila melanogaster
Sequence 2:XP_011244373.1 Gene:Gm4802 / 216818 MGIID:3647922 Length:145 Species:Mus musculus


Alignment Length:133 Identity:68/133 - (51%)
Similarity:81/133 - (60%) Gaps:24/133 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            :|||:||||..||||||:|||||||||.||||.||||||||||:|.|||||||.|||:..||.:|
Mouse    20 VQIFLKTLTDNTITLEVKPSDTIENVKDKIQDSEGIPPDQQRLVFNGKQLEDGCTLSNCYIQNQS 84

  Fly    66 TLHLVLRLRGGA------KKRKKKNYSTPKKIKHKRKKVKLAVLKYYKVDENGKIHRLRRECPGE 124
            ||:|.|.|..|.      :..:|.|:.            |:...||||     .:|....:| .|
Mouse    85 TLYLELPLCDGIIEPSLHQLAQKYNWE------------KMICRKYYK-----PLHPHAVQC-NE 131

  Fly   125 NCG 127
            .||
Mouse   132 KCG 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS27ANP_476778.1 Ubl_ubiquitin 1..76 CDD:340501 55/74 (74%)
Ribosomal_S27 103..147 CDD:396259 9/25 (36%)
Gm4802XP_011244373.1 Ubiquitin_like_fold 20..92 CDD:391949 54/71 (76%)
Ribosomal_L40e 98..143 CDD:366420 12/55 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1536766at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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