DRSC - DRSC Integrative Ortholog Prediction Tool

DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS27A and F52C6.4

DIOPT Version :10

Sequence 1:	NP_476778.1	Gene:	RpS27A / 34420	FlyBaseID:	FBgn0003942	Length:	156	Species:	Drosophila melanogaster
Sequence 2:	NP_001379809.1	Gene:	F52C6.4 / 186086	WormBaseID:	WBGene00018661	Length:	100	Species:	Caenorhabditis elegans

Alignment Length:	36	Identity:	17/36 - (47%)
Similarity:	25/36 - (69%)	Gaps:	5/36 - (13%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 36
            |.:.|||.||||||:|..     :|||.:::||:|:
Worm     1 MLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 31

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
RpS27A	NP_476778.1	Ubl_ubiquitin	1..76	CDD:340501	17/36 (47%)
RpS27A	NP_476778.1	Ribosomal_S27	103..147	CDD:460261
F52C6.4	NP_001379809.1	Ubl1_cv_Nsp3_N-like	1..>31	CDD:475130	16/34 (47%)
F52C6.4	NP_001379809.1	Ubl1_cv_Nsp3_N-like	72..>100	CDD:475130
Blue background indicates that the domain is not in the aligned region.

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