DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS27A and AgaP_AGAP001969

DIOPT Version :9

Sequence 1:NP_476778.1 Gene:RpS27A / 34420 FlyBaseID:FBgn0003942 Length:156 Species:Drosophila melanogaster
Sequence 2:XP_321092.3 Gene:AgaP_AGAP001969 / 1281153 VectorBaseID:AGAP001969 Length:309 Species:Anopheles gambiae


Alignment Length:148 Identity:59/148 - (39%)
Similarity:85/148 - (57%) Gaps:29/148 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            ||||||.||||||.::.||..|:|:||.:|.::|.|||:|||:|||||||||||.|.:|:|.|.|
Mosquito     1 MQIFVKMLTGKTIAVDTEPEATVESVKKQIDEREEIPPNQQRMIFAGKQLEDGRQLQEYSIIKGS 65

  Fly    66 TLHLVLRLRGGAK---------------------KRKKKNYSTPKKIKHKRKKVKLA-------- 101
            |:||||||:||.:                     :..||.....::|...::::..|        
Mosquito    66 TIHLVLRLKGGMQIFVKMLTGKTIAVDTEPEATVESVKKQIDEREEIPPNQQRMIFAGKQLEDGR 130

  Fly   102 VLKYYKVDENGKIHRLRR 119
            .|:.|.:.:...:|.:.|
Mosquito   131 QLQEYSIIKGSTVHLVLR 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS27ANP_476778.1 Ubl_ubiquitin 1..76 CDD:340501 49/74 (66%)
Ribosomal_S27 103..147 CDD:396259 4/17 (24%)
AgaP_AGAP001969XP_321092.3 UBQ 1..76 CDD:294102 49/74 (66%)
UBQ 1..72 CDD:214563 46/70 (66%)
UBQ 77..152 CDD:294102 8/72 (11%)
UBQ 77..148 CDD:214563 7/70 (10%)
UBQ 153..228 CDD:294102
UBQ 153..224 CDD:214563
UBQ 229..304 CDD:294102
UBQ 229..300 CDD:214563
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1536766at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10666
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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