DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS27A and AgaP_AGAP000733

DIOPT Version :9

Sequence 1:NP_476778.1 Gene:RpS27A / 34420 FlyBaseID:FBgn0003942 Length:156 Species:Drosophila melanogaster
Sequence 2:XP_311268.5 Gene:AgaP_AGAP000733 / 1272322 VectorBaseID:AGAP000733 Length:390 Species:Anopheles gambiae


Alignment Length:64 Identity:26/64 - (40%)
Similarity:40/64 - (62%) Gaps:3/64 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGI--PPDQQRLIFAGKQLEDGRTLSDYNI 61
            |:|.:|||..:|..:||: ..||:..:|.|:..:.|:  |.|:||||:.||.:||...||.|.:
Mosquito     1 MKITLKTLKQQTFFVEVDVEQDTVRTLKEKLHAESGLAYPVDRQRLIYLGKIMEDDHLLSQYKL 64

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS27ANP_476778.1 Ubl_ubiquitin 1..76 CDD:340501 26/64 (41%)
Ribosomal_S27 103..147 CDD:396259
AgaP_AGAP000733XP_311268.5 rad23 1..387 CDD:273167 26/64 (41%)
RAD23_N 1..78 CDD:176400 26/64 (41%)
UBA1_NUB1_like 180..212 CDD:270477
XPC-binding 260..315 CDD:286376
UBA_like_SF 346..384 CDD:304366
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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