DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS27A and zfand4

DIOPT Version :10

Sequence 1:NP_476778.1 Gene:RpS27A / 34420 FlyBaseID:FBgn0003942 Length:156 Species:Drosophila melanogaster
Sequence 2:NP_001189400.1 Gene:zfand4 / 100148477 ZFINID:ZDB-GENE-090312-102 Length:673 Species:Danio rerio


Alignment Length:76 Identity:39/76 - (51%)
Similarity:51/76 - (67%) Gaps:0/76 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            |::|::||||....|.|.|.:.:.:||||||..||||..||.||:.|.:|||...|.||:|.:..
Zfish    28 MELFIETLTGTCFQLRVSPFEQVVSVKAKIQRLEGIPVSQQHLIWNGMELEDEYCLHDYSITEGC 92

  Fly    66 TLHLVLRLRGG 76
            ||.|||.:|||
Zfish    93 TLKLVLAMRGG 103

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS27ANP_476778.1 Ubl_ubiquitin 1..76 CDD:340501 37/74 (50%)
Ribosomal_S27 103..147 CDD:460261
zfand4NP_001189400.1 Ubl_ZFAND4 28..101 CDD:340500 36/72 (50%)
ZnF_AN1 613..651 CDD:197545
Blue background indicates that the domain is not in the aligned region.

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