DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS27A and Isg15

DIOPT Version :9

Sequence 1:NP_476778.1 Gene:RpS27A / 34420 FlyBaseID:FBgn0003942 Length:156 Species:Drosophila melanogaster
Sequence 2:NP_056598.2 Gene:Isg15 / 100038882 MGIID:1855694 Length:161 Species:Mus musculus


Alignment Length:76 Identity:25/76 - (32%)
Similarity:42/76 - (55%) Gaps:0/76 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            :.|.|:...|.:...||..:.|::.:|.|:..:|.:..||..|.|.|:.:||...|.:|.::.:.
Mouse    80 LSILVRNERGHSNIYEVFLTQTVDTLKKKVSQREQVHEDQFWLSFEGRPMEDKELLGEYGLKPQC 144

  Fly    66 TLHLVLRLRGG 76
            |:...||||||
Mouse   145 TVIKHLRLRGG 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS27ANP_476778.1 Ubl_ubiquitin 1..76 CDD:340501 23/74 (31%)
Ribosomal_S27 103..147 CDD:396259
Isg15NP_056598.2 Ubl1_ISG15 3..75 CDD:340490
Ubl2_ISG15 80..153 CDD:340508 21/72 (29%)
LRLRGG. /evidence=ECO:0000250 150..155 4/4 (100%)
Involved in the ligation of specific target proteins. /evidence=ECO:0000250 151..155 3/3 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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