DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cnot4 and MOT2

DIOPT Version :10

Sequence 1:NP_001260343.1 Gene:Cnot4 / 34416 FlyBaseID:FBgn0051716 Length:1062 Species:Drosophila melanogaster
Sequence 2:NP_010991.3 Gene:MOT2 / 856799 SGDID:S000000870 Length:587 Species:Saccharomyces cerevisiae


Alignment Length:672 Identity:180/672 - (26%)
Similarity:286/672 - (42%) Gaps:164/672 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NGLS-------SNDDAVECPLCMEPLEVDDLTFFPCTCGYQICRFCWHRIRTDE--NKLCPACRK 57
            |.||       |.|:...||||:||:::.|..||||.||||||:||::.||.:.  |..|||||:
Yeast    15 NALSNFDTSFLSEDEEDYCPLCIEPMDITDKNFFPCPCGYQICQFCYNNIRQNPELNGRCPACRR 79

  Fly    58 EYPENPADFKPLSQEEM------IAFKSQKRQ-RDQQRKQKITENRKHLANVRVVQKNLVFVVGL 115
            :|.:....:..||.||:      :|.|.::|: |:::||:....|||||:..||:|||||:|||:
Yeast    80 KYDDENVRYVTLSPEELKMERAKLARKEKERKHREKERKENEYTNRKHLSGTRVIQKNLVYVVGI 144

  Fly   116 PPRLADADI---LKKHEYFGKYGKIHKVVINPSTTYAGVQV-----RVGPSASAYVTYVNNSDAL 172
            .|.:...::   ||..:|||:||||:|:|:|..|.::....     ...|....|:|:.:..||.
Yeast   145 NPPVPYEEVAPTLKSEKYFGQYGKINKIVVNRKTPHSNNTTSEHYHHHSPGYGVYITFGSKDDAA 209

  Fly   173 RAIQSVNNIMIDGRLIKTSLGTTKYCSHFMKNQQCPKGDCMYLHELGDPEASFTKEEMHQGKHLE 237
            |.|..|:...:||||||.:.|||||||.:::...||..:||:|||.|:...||.|.|:|..:..:
Yeast   210 RCIAQVDGTYMDGRLIKAAYGTTKYCSSYLRGLPCPNPNCMFLHEPGEEADSFNKRELHNKQQAQ 274

  Fly   238 YE--------KRLHDTLIASLGPNATGIVNGNGASKANVAIPSSSSASSSSSGSGTNGSSASGNA 294
            .:        ..:|:.:..|...:.|.:::.|.....:.|...:.....|.:.:||         
Yeast   275 QQSGGTAFTRSGIHNNISTSTAGSNTNLLSENFTGTPSPAAMRAQLHHDSHTNAGT--------- 330

  Fly   295 QQKEAWPSLSVSPIN------GKEAAATATSSSGKSKREKLRNEKRHEKNKAKNKNGSNTN---A 350
                  |.|:.:|:.      |...:||..:|...|                  ||.|:.|   .
Yeast   331 ------PVLTPAPVPAGSNPWGVTQSATPVTSINLS------------------KNSSSINLPTL 371

  Fly   351 NASNKENYVPETR---SSTSTETFAEATADAPASTKAEPPQASSNRTRADRGKDRTTASAKEQKK 412
            |.|...:..|.|.   :||:|.|...||:.:..|                  |.:.:.:|:|.|.
Yeast   372 NDSLGHHTTPTTENTITSTTTTTNTNATSHSHGS------------------KKKQSLAAEEYKD 418

  Fly   413 SKEAAPAPAASKPAERVET---SESTIRQKKAEVTESCEDNLPQKRLAGTNVQRSVSSCSENSEG 474
                 |..|.....:.::.   |.|..:::...:..:..|....|:..           |..|..
Yeast   419 -----PYDALGNAVDFLDARLHSLSNYQKRPISIKSNIIDEETYKKYP-----------SLFSWD 467

  Fly   475 HVSESSLSEKSLTGDYVE-------EKCNSVNSESQQESVKFQEELEKSNEAIVEAETILPTAES 532
            .:..|..|:.:|....||       :...||        |:|   |:..|..:.:..||  |..:
Yeast   468 KIEASKKSDNTLANKLVEILAIKPIDYTASV--------VQF---LQSVNVGVNDNITI--TDNT 519

  Fly   533 SEDISPAAVAPGNGEVEGCLPVVDPVEPPSLADNGSRVTDALSKLNIFDDTPSFFTSPSFQQAPI 597
            .....|..:.          .|...::||               ||:....|..| .|. .:.||
Yeast   520 KTPTQPIRLQ----------TVSQQIQPP---------------LNVSTPPPGIF-GPQ-HKVPI 557

  Fly   598 LKNKL-DLEMRQSHLPDLVNDI 618
            .:.:: |...|.|  .||:|.:
Yeast   558 QQQQMGDTSSRNS--SDLLNQL 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cnot4NP_001260343.1 MOT2 5..>235 CDD:227502 104/253 (41%)
cwf18 312..>386 CDD:462423 19/79 (24%)
MOT2NP_010991.3 MOT2 9..560 CDD:227502 174/651 (27%)

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